Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_007902.1 Length=52162 Score E Sequences producing significant alignments: (Bits) Value seq34134 187 8e-43 seq34135 95.1 4e-15 >seq34134 Length=706 Score = 187 bits (206), Expect = 8e-43 Identities = 406/602 (67%), Gaps = 7/602 (1%) Strand=Plus/Minus Query 23544 GATA-CGCCCACTGTTCGAGCAATCCGGCCAG--TTCGTTAACCAGCTCCAGCATATCAC 23600 |||| || ||| ||||| ||||| | || || | | | |||| ||||| |||||| | Sbjct 628 GATATCGGCCATTGTTCAAGCAAACTAGCGAGACTACCT--ACCAACTCCATCATATCCC 571 Query 23601 GGGTACGAATGTGCTTCTGCACCAGTTCCAGCAGCGCCACCCGGCGATGGGTCAGGATTT 23660 | ||||| || ||||| || |||| ||| || ||||||||||| |||| || | Sbjct 570 TCACCCTGATGTGTTTTTGCACGAGCTCCATCAGGGCTACCCGGCGATGCGTCAAAATCT 511 Query 23661 CGTCATCCGGTATTGCAGTGATATCGACCAGCGGAAATGCCTGATGATAAACCGTGGCCG 23720 | ||||| ||| | | || || || |||| |||||||||||| | || |||| | Sbjct 510 CTTCATCTGGTGTCACGGTAATGTCAACCAACGGAAATGCCTGCTCGTACACCGATTGTG 451 Query 23721 CCAATTCTGGCTCAGCAAAACAGTCCAGACAGCGCGTGCTGTACGGATACGGCGACGTGG 23780 ||||| || || ||||| ||||| | || | || | || || || ||||| || | Sbjct 450 CCAATGTGGGGTCTGCAAAGCAGTCAAACCACTGGGTAGTATAGGGGTAGGGCGAGGTAG 391 Query 23781 TGCCGTGGTAAAACAGCAGCGGAATGACCACCGGTAGCTGATCGTTGCCCTGTTCTAGAT 23840 |||| || || | || || || || || || || ||| | |||||| || || | || Sbjct 390 TGCCATGATACAGCAACATGGGTATTACGACGGGGAGCGTTTTGTTGCCTTGCTCGACAT 331 Query 23841 GCCGCTGCATCGCGGCGACCGCATACCGTAGCAATCGAAACGCCATCAGCTTTTCCGGGC 23900 | | |||||| | || | ||||| | ||| ||||| |||||||| || |||| Sbjct 330 GTCTATGCATCACAGCAATGCTATACCTCATCAAGCGAAAGGCCATCAGTGGGTCAGGGC 271 Query 23901 GGCTCTGGTGCTCTATCAGACAGTAGACGTAACCA-TCATGGCCCGTCGTGGTCTTCATC 23959 | ||||| || | |||||||| | | ||| || | | | || || | | Sbjct 270 TGGATTGGTGTTCCACGAGACAGTAAATAAACCCAGTCCCCG-CGGAGGTAGTGCTAACA 212 Query 23960 GAGTAGAGCATATCCGAGCACTGGCCCTTCAGGTCGTCTTCGATAAATGAGCCGGAAGCC 24019 || || | |||||| ||||| || |||||||| || || ||||| ||||| || || Sbjct 211 GAATACAACATATCTGAGCATTGTGATTTCAGGTCATCCTCAATAAAGGAGCCAGATTCC 152 Query 24020 ATCGCCAATGTGCCGAAATCGCAGCGCTTACGCAGGTGCGGCGGCAGATGGATTTCCAGA 24079 |||| || || | ||||||||| ||| | | | | |||| ||| || || | | Sbjct 151 ATCGTTAACGTACTGAAATCGCATAGCTGTTGTATTTTCTTAGGCAAATGTATCTCTAAA 92 Query 24080 AAGTCCCGAGCGACCGCGATATCGCCAAGGAACTTTTTGAATACGTGGTCATGGTGCGAC 24139 || ||||| || | | | ||||| || ||||||||||| || | | || |||| ||| Sbjct 91 AAATCCCGTGCTATCTCAATATCCCCGAGGAACTTTTTAAAAAAGGTATCGTGGTATGAC 32 Query 24140 AG 24141 || Sbjct 31 AG 30 >seq34135 Length=222 Score = 95.1 bits (104), Expect = 4e-15 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 23614 CTTCTGCACCAGTTCCAGCAGCGCCACCCGGCGATGGGTCAGGATTTCGTCATCCGGTAT 23673 ||| ||||| || |||| || ||| || || ||||| ||||||||||| ||||| ||| | Sbjct 222 CTTTTGCACGAGCTCCATCAACGCTACACGACGATGCGTCAGGATTTCCTCATCTGGTGT 163 Query 23674 TGCAGTGATATCGACCAGCGGAAATGCCTGATGATAAACCGTGGCCGCCAATTCTGGCTC 23733 |||||| || |||| |||||||| || ||| || | |||||| || || Sbjct 162 GATAGTGATGTCAACCAATGGAAATGCTTGGGTATAGACAGCTTGTGCCAATGTGGGGTC 103 Query 23734 AGCAAAACAGTCCAGACAGCGCGTGCTGTACGGATACGGCGACGTGGTGCCGTGGTAAAA 23793 ||||| ||||| | || | || | || ||||| ||||| || | ||| || || | Sbjct 102 TGCAAAGCAGTCAAACCACTGGGTAGTATAGGGATAAGGCGAGGTAGCGCCATGATACAG 43 Query 23794 CAGCAGCGGAATGACCACCGGTAGCTGATCGTTGCCCTGTTC 23835 || || || || || || || ||| | |||||| || || Sbjct 42 CAACATGGGTATTACGACGGGGAGCGTTTTGTTGCCTTGCTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166685196782360