Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq13154 96.9 1e-15 >seq13154 Length=83798 Score = 96.9 bits (106), Expect = 1e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 33682 CCTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTCACCAGCAATTTCAGCGAGCTTG 33741 ||||| | |||||| || || || || | | ||| || || | |||||| | || Sbjct 29398 CCTTCGATATAAACCTGCGATCCCTTTCGCAAATATTCTTTTGCCACTTCAGCTATTTTA 29457 Query 33742 CCAAAGATAACTACGCGGTGCCATTCAGTTTGCTCCTTTTTCTCACCAGTAGCCTTATCA 33801 || || | ||| || || |||||||| || | ||||||| || ||||| ||||| Sbjct 29458 CCGAACAAAACGACACGATGCCATTCTGTCTTCTCCTTTGGTTCGCCAGTTTGTTTATCG 29517 Query 33802 TTCCATGATTCCGATGTAGCAACAGATACGTTGGCAACAGCGCCGCCATTTGGCATGTAT 33861 ||| ||| | || || ||||| | |||||||||||| || || |||||||| || Sbjct 29518 CGCCAGCTTTCAGTCGTTGCCACAGAGATGTTGGCAACAGCCCCCCCGTTTGGCATATAA 29577 Query 33862 CGCACTTCTGGGTCCTGGCCTAA 33884 || | |||||| ||||| ||||| Sbjct 29578 CGAATTTCTGGATCCTGACCTAA 29600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144875799152560