Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_031940.1 Length=77375 Score E Sequences producing significant alignments: (Bits) Value seq55467 497 5e-136 seq54837 179 2e-40 seq55042 127 1e-24 >seq55467 Length=2484 Score = 497 bits (550), Expect = 5e-136 Identities = 807/1149 (70%), Gaps = 13/1149 (1%) Strand=Plus/Plus Query 38947 AGGTTAACGCCTCAAACATGAACCGTCCGGAGGATGGCGCGCGGTTTGAACCGCTGATCG 39006 ||||||| ||||| ||||| |||||||| ||||| || || || || || || || | Sbjct 1 AGGTTAATGCCTCCAACATAAACCGTCCCATCGATGGGGCCCGTTTCGAGCCACTAATTG 60 Query 39007 GTAACCCCGGTGATGGTTCATCACCCCACTGTGCTGTGGTGGATGAATATCACGAGCATG 39066 | |||||||| ||||| | || || || ||| | | ||||||| || || || | Sbjct 61 GCAACCCCGGCGATGGGGCTTCTCCTCATCTTGCCATTATCGATGAATTCCATGAACACG 120 Query 39067 CCACAGATGCA--CTTTACACCACGATGCTTACCGGGATGGGCGCGCGACGTCAGCCACT 39124 | | | ||| ||||| ||| ||| | ||||| |||||||| || | || || || Sbjct 121 AAA-ATA-GCAATCTTTATCACACAATGTTGACCGGTATGGGCGCCCGGCAGCAACCGCT 178 Query 39125 GATGTGGGCCATCACCACCGCCGGGTACAACATTGAGGGGCCGTGCTACGACAAGCGGCG 39184 || ||| | || || ||||| | |||| || || || || || |||||||| || Sbjct 179 TATCTGGAGTGTGACGACAGCCGGTAATGACATCGAAGGTCCCTGTTATGACAAGCGCCG 238 Query 39185 GGAAGTCATCGAGATGCTCAACGGCTCGGTGCCTAACGATGAACTGTTCGGGATCATCTA 39244 ||||||||| || ||||| | | ||||| ||||| ||| | || ||| | || || Sbjct 239 GGAAGTCATTGATATGCTAACCCAGGTAGTGCCCAACGACGAATTATTTGGGTTAATTTA 298 Query 39245 TACCGTTGATGAAGGTGACGACTGGACCGACCCGCAGGTGCTGGAAAAAGCCAATCCAAA 39304 ||| | ||||| || || || |||||| | || | || ||||||||||| || Sbjct 299 CACCCTCGATGAGGGAGAGGATTGGACCCAGCCAGCCGCCCTCAGCAAAGCCAATCCCAA 358 Query 39305 TATTGGCGTGTCGGTTTATCGCGAATTTTTGTTAAGTCAGCAGCAGCGTGCGAAAAATAA 39364 || ||||| || |||| | || ||| || |||| || || || || || | || || Sbjct 359 CATGGGCGTCTCTATTTACCCTGATTTTCTGCTAAGCCAACAACAACGAGCCATCAACAA 418 Query 39365 CGCCCGTCTGGCAAACGTCTTTAAAACAAAACACCTCAATATCTGGGTGTCGGCGCGTTC 39424 ||| | | || |||| ||||||||| ||||||||||||||||||||||| || ||||| Sbjct 419 TGCCAGACAAGCCAACGCCTTTAAAACCAAACACCTCAATATCTGGGTGTCAGCACGTTC 478 Query 39425 GGCGTATTTCAACCTGGTGAGCTGGCAGAGCT-GCGAGGATAAATCACTGACCCTTGAGC 39483 ||| | |||||| |||||| ||||| | ||| | || || | ||||| | || | Sbjct 479 GGCTTTCTTCAACATGGTGAACTGGC-GCGCTTGTGAAGACACCAGCCTGACTTTGGATC 537 Query 39484 AGTTCGAGGGGCAGCCGTGCATTCTGGCCTTTGACCTGGCGCGTAAGCTGGATATGAACA 39543 | ||||| || || | || | | | ||||| ||||||| ||||| |||||||| | Sbjct 538 AATTCGAAGGACAAGCCTGTTATTTAGGGTTTGATTTGGCGCGCAAGCTAGATATGAATA 597 Query 39544 GCATGGCGCGACTTTATACCCGCGAGATTGACGGTAAAACG-CATTACTACAGTGTGGCC 39602 ||||||| || | | || ||| |||||| |||| |||||| ||||| |||||| | ||| Sbjct 598 GCATGGCCCGCGTGTTTATCCGTGAGATTAACGG-AAAACGTCATTATTACAGTATTGCC 656 Query 39603 CCGCGTTTCTGGGTACCGTATGACACGGTGTACAGCGTCGAGAAAAATGAAGATCGCCGG 39662 || | |||||||| || || |||| |||||||| | || | || || ||| || Sbjct 657 CCTAGGTTCTGGGTGCCTTACGACAGCGTGTACAGTGCAGATACCAACGA---TCGTCGC 713 Query 39663 ACAGCCGAACGCTTTCAGAAATGGGTGGAAATGGGCGTTCTGACTGTTACCGCTGGTGCG 39722 ||||| ||||| ||||| || ||||| | ||| | || | | |||| || || Sbjct 714 ACAGCGGAACGATTTCAAAAGTGGGTCAATATGCACCAGCTAATCGCGACCGACGGGGCA 773 Query 39723 GAGGTGGATTATCGCTACATCCTCGAGGAGGCCAAAGCGGCGAACAAAATCAGCCCGGTC 39782 || || || || || || |||||||| || || || || || ||| | | ||||||| Sbjct 774 GAAGTTGACTACCGGTATATCCTCGAAGAAGCAAAGGCCGCTAACTGTCTTAACCCGGTC 833 Query 39783 AGTG-AGTCACCCATCGACCCCTTCGGGGCGACCGGGCTGTCGCATGACCTTGCTGATGA 39841 ||| | ||| | ||||| || || || || || ||| ||| | | || || || Sbjct 834 -GTGCAATCAGCGATCGATCCTCATGGCGCCACTGGCCTGAGTCATCAGTTGGCCGACGA 892 Query 39842 AGACCTGAACCCCATCACCATCATTCAGAACTACACCAACATGTCCGATCCGATGAAAGA 39901 | || ||||| ||||||| || || || ||||| | ||||| ||| | |||||||| Sbjct 893 GCAACTTAACCCTGTCACCATTATCCAAAATTACACGCATATGTCAGATGCCATGAAAGA 952 Query 39902 GCTGGAAGCGGCGATTGAATCGGGGCGCTTTCATCATGACGGCAATCCCATCATGACCTG 39961 ||||||| || |||||||| || |||||||| || || || | |||||||||||||| Sbjct 953 ATTGGAAGCCGCCATTGAATCTGGCCGCTTTCACCACGATGGTCACCCCATCATGACCTG 1012 Query 39962 GTGTATCGGCAACGTAGTCGGCAAAACCATTCCGGGTAACGATGATGTGGTGAAGCCTGT 40021 ||| ||| ||||||| || || ||| | |||||||||||||| | || || | Sbjct 1013 GTGCATCAGCAACGTGGTGGGTAAACATGTGCCGGGTAACGATGACATTGTTCGCCCGAT 1072 Query 40022 CAAGGAGCAGGCGGAAAATAAAATCGATGGTGCAGTTGCACTGATTATGGCGGTTGGCAG 40081 || || |||| ||||| ||||| || || || || ||| | || ||||| ||||| | Sbjct 1073 AAAAGAACAGGAAGAAAACAAAATTGACGGCGCCGTCGCATTAATCATGGCAGTTGGTCG 1132 Query 40082 AGCCATGCT 40090 || ||||| Sbjct 1133 GGCAATGCT 1141 Score = 217 bits (240), Expect = 7e-52 Identities = 353/505 (70%), Gaps = 6/505 (1%) Strand=Plus/Plus Query 1 TTACTACAGTGTGGCCCCGCGTTTCTGGGTACCGTATGACACGGTGTACAGCGTCGAGAA 60 ||| |||||| | ||||| | |||||||| || || |||| |||||||| | || | Sbjct 641 TTATTACAGTATTGCCCCTAGGTTCTGGGTGCCTTACGACAGCGTGTACAGTGCAGATAC 700 Query 61 AAATGAAGATCGCCGGACAGCCGAACGCTTTCAGAAATGGGTGGAAATGGGCGTTCTGAC 120 || || ||| || ||||| ||||| ||||| || ||||| | ||| | || | Sbjct 701 CAACGA---TCGTCGCACAGCGGAACGATTTCAAAAGTGGGTCAATATGCACCAGCTAAT 757 Query 121 TGTTACCGCTGGTGCGGAGGTGGATTATCGCTACATCCTCGAGGAGGCCAAAGCGGCGAA 180 | |||| || || || || || || || || |||||||| || || || || || || Sbjct 758 CGCGACCGACGGGGCAGAAGTTGACTACCGGTATATCCTCGAAGAAGCAAAGGCCGCTAA 817 Query 181 CAAAATCAGCCCGGTCAGTG--AGCACCCATCGACCCCTTCGGGGCGACCGGGCTGTCGC 238 | | | ||||||| ||| | || | ||||| || || || || || ||| | Sbjct 818 CTGTCTTAACCCGGTC-GTGCAATCAGCGATCGATCCTCATGGCGCCACTGGCCTGAGTC 876 Query 239 ATGACCTTGCTGATGAAGACCTGAACCCCATCACCATCATTCAGAACTACACCAACATGT 298 || | | || || || | || ||||| ||||||| || || || ||||| | |||| Sbjct 877 ATCAGTTGGCCGACGAGCAACTTAACCCTGTCACCATTATCCAAAATTACACGCATATGT 936 Query 299 CCGATCCGATGAAAGAGCTGGAAGCGGCGATTGAATCGGGGCGCTTTCATCATGACGGCA 358 | ||| | |||||||| ||||||| || |||||||| || |||||||| || || || Sbjct 937 CAGATGCCATGAAAGAATTGGAAGCCGCCATTGAATCTGGCCGCTTTCACCACGATGGTC 996 Query 359 ATCCCATCATGACCTGGTGTATCGGCAACGTAGTCGGCAAAACCATTCCGGGTAACGATG 418 | ||||||||||||||||| ||| ||||||| || || ||| | ||||||||||||| Sbjct 997 ACCCCATCATGACCTGGTGCATCAGCAACGTGGTGGGTAAACATGTGCCGGGTAACGATG 1056 Query 419 ATGTGGTGAAGCCTGTCAAGGAGCAGGCGGAAAATAAAATCGATGGTGCAGTTGCACTGA 478 | | || || | || || |||| ||||| ||||| || || || || ||| | | Sbjct 1057 ACATTGTTCGCCCGATAAAAGAACAGGAAGAAAACAAAATTGACGGCGCCGTCGCATTAA 1116 Query 479 TTATGGCGGTTGGCAGAGCCATGCT 503 | ||||| ||||| | || ||||| Sbjct 1117 TCATGGCAGTTGGTCGGGCAATGCT 1141 >seq54837 Length=669 Score = 179 bits (198), Expect = 2e-40 Identities = 215/292 (74%), Gaps = 0/292 (0%) Strand=Plus/Minus Query 46614 AACGCTTCACGACGACTGAACAGCAGACGTTACTTTCCCACGGTGTGGCAACGGCGTATG 46673 |||| || || |||||||||||| | | | |||| || | || ||||| || | Sbjct 324 AACGTTTTACCTTGACTGAACAGCAATCACTGTTAACCCATGGCATCGCCACGGCCTACG 265 Query 46674 TGGAAAGCGGCGTGCTGCGTATTCAGCGGGATATCACGACGTACAGGAAAAATGCGTATG 46733 | ||| |||| |||||| ||||| || || ||||| || ||| ||||||||| || | Sbjct 264 TAGAAGGCGGGCAGCTGCGGATTCAACGTGAAATCACCACCTACCAGAAAAATGCTTACG 205 Query 46734 GTGTGGCGGATAACAGCTACCTTGACAGCGAGACGCTGCATACCAGTGCTTATGTGTTGC 46793 | || ||||||||||| || |||||||| || |||||||||||||||||||| || Sbjct 204 GCAATGCTGATAACAGCTATCTGGACAGCGAAACCTTGCATACCAGTGCTTATGTGCTGA 145 Query 46794 GCCGTCTGAAATCTGTTATTACCAGTAAATACGGGCGCCATAAACTTGCTAATGATGGTA 46853 | || |||||| ||| || || || ||||| || || ||| | || ||||| || | Sbjct 144 GACGCCTGAAAAGTGTGATCACGAGCAAATATTCACGACACAAATTAGCCAATGACGGGA 85 Query 46854 CGCGTTTCGGGTCTGGTCAGGCCATTGTCACGCCTGCCGTTATCCGTGGTGA 46905 |||| || ||| | || || ||||| ||||| |||| ||| || |||||||| Sbjct 84 CGCGCTTTGGGCCAGGGCAAGCCATCGTCACCCCTGTCGTCATTCGTGGTGA 33 Score = 179 bits (198), Expect = 2e-40 Identities = 207/279 (74%), Gaps = 0/279 (0%) Strand=Plus/Minus Query 7038 GACTGAACAGCAGACGTTACTTTCCCACGGTGTGGCAACGGCGTATGTGGAAAGCGGCGT 7097 |||||||||||| | | | |||| || | || ||||| || || ||| |||| Sbjct 311 GACTGAACAGCAATCACTGTTAACCCATGGCATCGCCACGGCCTACGTAGAAGGCGGGCA 252 Query 7098 GCTGCGTATTCAGCGGGATATCACGACGTACAGGAAAAATGCGTATGGTGTGGCGGATAA 7157 |||||| ||||| || || ||||| || ||| ||||||||| || || || ||||| Sbjct 251 GCTGCGGATTCAACGTGAAATCACCACCTACCAGAAAAATGCTTACGGCAATGCTGATAA 192 Query 7158 CAGCTACCTTGACAGCGAGACGCTGCATACCAGTGCTTATGTGTTGCGCCGTCTGAAATC 7217 |||||| || |||||||| || |||||||||||||||||||| || | || |||||| Sbjct 191 CAGCTATCTGGACAGCGAAACCTTGCATACCAGTGCTTATGTGCTGAGACGCCTGAAAAG 132 Query 7218 TGTTATTACCAGTAAATACGGGCGCCATAAACTTGCTAATGATGGTACGCGTTTCGGGTC 7277 ||| || || || ||||| || || ||| | || ||||| || ||||| || ||| | Sbjct 131 TGTGATCACGAGCAAATATTCACGACACAAATTAGCCAATGACGGGACGCGCTTTGGGCC 72 Query 7278 TGGTCAGGCCATTGTCACGCCTGCCGTTATCCGTGGTGA 7316 || || ||||| ||||| |||| ||| || |||||||| Sbjct 71 AGGGCAAGCCATCGTCACCCCTGTCGTCATTCGTGGTGA 33 >seq55042 Length=1078 Score = 127 bits (140), Expect = 1e-24 Identities = 356/545 (65%), Gaps = 31/545 (6%) Strand=Plus/Minus Query 46937 GAAGGCATCGTGGAAAACTTCGATCTGTTCCAGCAACATCTGA-TAGTTGAGCGTAACGC 46995 ||||| || |||||||||||||||||||| ||||| | | | | || ||||| ||||| Sbjct 1078 GAAGGGATAGTGGAAAACTTCGATCTGTTT-AGCAAAAAGTTAATCGTAGAGCGCAACGC 1020 Query 46996 GAACAATTCGAACCGCCTGGATGTGCTGTTTCCGCCTGATTATGTCAATCAGTTACGTGT 47055 | | | | || || | ||||||||||| || |||||||| | || ||| | ||||| Sbjct 1019 CACCGACCCCAATCGTATAGATGTGCTGTTGCCCCCTGATTACATTAACCAGCTTCGTGT 960 Query 47056 GTTTGCAGTGCTTAACCAGTTCCGTCTGCAGTACAGCGAGGA----GGCT-GCA------ 47104 |||||| ||||| || ||||| || |||||||| ||||| | || ||| Sbjct 959 GTTTGCGGTGCTGAATCAGTTTCGGCTGCAGTATCAAGAGGAAGAGGACTAGCAATGATA 900 Query 47105 --------------TAATGGGAAAAATTGCGGGAACAACGTATTTCAAAATCGACGGACA 47150 ||||| || ||||| || || || |||||| | || || | Sbjct 899 AAAGGGAATAAAATAAATGGCTAAGATTGCCGGCACCTGTTACTTCAAAGTAGATGGGTA 840 Query 47151 GCAACTGTCGGTAACCGGAGGGATTGAAGTCCCCATGAACACCAAAGTTCGTGACGACGT 47210 || | || | || || || ||||||||||| |||||||| || | || || | Sbjct 839 TCAGTTATCTCTGACAGGGGGAATTGAAGTCCCGATGAACACAGTGGTCAGAGAAGATAT 780 Query 47211 GATTGGCCTGGATGGTTCCGTTGACTACAAGGAAACCAGCCGGGCACCGTATACGAAGGT 47270 || ||||||| || || || ||||| ||||| | |||| || | | || | Sbjct 779 CATCGGCCTGGCAGGGGATGTAGATTACAAAGAAACTTACAGGGCGCCTCACATAAAAGG 720 Query 47271 GACCGCCAAAGTGCCGAAAAACTTCCCGGTCGATAAAATTACGTCTTCTGA--TGTCATG 47328 || || ||||| |||||| |||||||| | || || | |||| Sbjct 719 AACGTTTAAGGTGCCAGCGCGCTTCCCTAAAGATAAAAT--CATCAGCTCAACCAGCATG 662 Query 47329 ACAATCACATCAGAGCTGGCAAATGGTCAGGTGTATGTTCTCTCAAACGCCTGGCTGCAC 47388 || |||||| |||| |||||||| | ||| || || | ||| || |||||||| Sbjct 661 ACCATCACAGCAGAACTGGCAAACAGCATGGTTTACGTCTTATCAGGGGCTTGGCTGCAT 602 Query 47389 GGCGAAGCCAACCATAACCCGGAAGAGGGCACCGTGGATCTTGAGTTCCACGGTGAGGAG 47448 || ||||| || ||| | ||||| || | ||||| || || || || ||||| || Sbjct 601 GGTGAAGCGAATGTTAATGCCGAAGAAGGAAAAGTGGAGCTGGAATTTCATGGTGAAGAA 542 Query 47449 GGATT 47453 ||||| Sbjct 541 GGATT 537 Score = 127 bits (140), Expect = 1e-24 Identities = 356/545 (65%), Gaps = 31/545 (6%) Strand=Plus/Minus Query 7348 GAAGGCATCGTGGAAAACTTCGATCTGTTCCAGCAACATCTGA-TAGTTGAGCGTAACGC 7406 ||||| || |||||||||||||||||||| ||||| | | | | || ||||| ||||| Sbjct 1078 GAAGGGATAGTGGAAAACTTCGATCTGTTT-AGCAAAAAGTTAATCGTAGAGCGCAACGC 1020 Query 7407 GAACAATTCGAACCGCCTGGATGTGCTGTTTCCGCCTGATTATGTCAATCAGTTACGTGT 7466 | | | | || || | ||||||||||| || |||||||| | || ||| | ||||| Sbjct 1019 CACCGACCCCAATCGTATAGATGTGCTGTTGCCCCCTGATTACATTAACCAGCTTCGTGT 960 Query 7467 GTTTGCAGTGCTTAACCAGTTCCGTCTGCAGTACAGCGAGGA----GGCT-GCA------ 7515 |||||| ||||| || ||||| || |||||||| ||||| | || ||| Sbjct 959 GTTTGCGGTGCTGAATCAGTTTCGGCTGCAGTATCAAGAGGAAGAGGACTAGCAATGATA 900 Query 7516 --------------TAATGGGAAAAATTGCGGGAACAACGTATTTCAAAATCGACGGACA 7561 ||||| || ||||| || || || |||||| | || || | Sbjct 899 AAAGGGAATAAAATAAATGGCTAAGATTGCCGGCACCTGTTACTTCAAAGTAGATGGGTA 840 Query 7562 GCAACTGTCGGTAACCGGAGGGATTGAAGTCCCCATGAACACCAAAGTTCGTGACGACGT 7621 || | || | || || || ||||||||||| |||||||| || | || || | Sbjct 839 TCAGTTATCTCTGACAGGGGGAATTGAAGTCCCGATGAACACAGTGGTCAGAGAAGATAT 780 Query 7622 GATTGGCCTGGATGGTTCCGTTGACTACAAGGAAACCAGCCGGGCACCGTATACGAAGGT 7681 || ||||||| || || || ||||| ||||| | |||| || | | || | Sbjct 779 CATCGGCCTGGCAGGGGATGTAGATTACAAAGAAACTTACAGGGCGCCTCACATAAAAGG 720 Query 7682 GACCGCCAAAGTGCCGAAAAACTTCCCGGTCGATAAAATTACGTCTTCTGA--TGTCATG 7739 || || ||||| |||||| |||||||| | || || | |||| Sbjct 719 AACGTTTAAGGTGCCAGCGCGCTTCCCTAAAGATAAAAT--CATCAGCTCAACCAGCATG 662 Query 7740 ACAATCACATCAGAGCTGGCAAATGGTCAGGTGTATGTTCTCTCAAACGCCTGGCTGCAC 7799 || |||||| |||| |||||||| | ||| || || | ||| || |||||||| Sbjct 661 ACCATCACAGCAGAACTGGCAAACAGCATGGTTTACGTCTTATCAGGGGCTTGGCTGCAT 602 Query 7800 GGCGAAGCCAACCATAACCCGGAAGAGGGCACCGTGGATCTTGAGTTCCACGGTGAGGAG 7859 || ||||| || ||| | ||||| || | ||||| || || || || ||||| || Sbjct 601 GGTGAAGCGAATGTTAATGCCGAAGAAGGAAAAGTGGAGCTGGAATTTCATGGTGAAGAA 542 Query 7860 GGATT 7864 ||||| Sbjct 541 GGATT 537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247305257620120