Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1571 219 6e-55 seq3511 131 3e-28 >seq1571 Length=308 Score = 219 bits (242), Expect = 6e-55 Identities = 209/258 (81%), Gaps = 11/258 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 35 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 92 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||||||||||| | ||||| | ||||| | | |||| | || Sbjct 93 CTCGTTCATGGGGAACAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAGCGGGTT 152 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||||||| || | || || ||| | | ||||||||||||||||||| Sbjct 153 ACCCGGGCCTTTCGGCCAGGGA---ACACACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 209 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 ||||||||||||||||||||||||||||||||||||| ||||| || |||| | ||| | Sbjct 210 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAGA 266 Query 239 AGGC-CATCTCCCTCGAA 255 || | | | |||||| || Sbjct 267 AGCCGCCTGTCCCTCTAA 284 >seq3511 Length=303053 Score = 131 bits (144), Expect = 3e-28 Identities = 170/228 (75%), Gaps = 18/228 (8%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT--TGATGACTCGCGCTTACTAGGAATT 58 ||||||| |||||||||||| |||||| ||||| ||| || | ||||||||||||| | Sbjct 136241 GTACAAAAGGCAGGGACGTAATCAACGTGAGCTTATGAGGAAT-TCGCTTACTAGGAA-T 136184 Query 59 TCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGA 117 ||||| || | | ||||||||||| | ||||| | |||| | | |||| || Sbjct 136183 TCCTCATTCATGGAGAACAATTGCAAGTCCCAATCCCTAGCACGGAGGAGGTTCACCGGA 136124 Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 |||||||| ||| ||| | | || | || || ||| | | |||||||| ||||||| Sbjct 136123 TTACCCGGGCCTTTCGTC---TGGGAAACACACGCTGATTCCTTCAGTGTAACGCGCGT- 136068 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||||||||||||| ||||||||||||||| ||||| || Sbjct 136067 ----CCAGAACATCTAAGGG----ACAGACCTGTTATTG-CTCAATCT 136029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751968390385