Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq3511 141 2e-31 >seq3511 Length=303053 Score = 141 bits (156), Expect = 2e-31 Identities = 190/260 (73%), Gaps = 17/260 (7%) Strand=Plus/Plus Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC---CTTTGCTCGAATA 121 ||| | || ||||||||||| |||||| |||| | ||||||| | | | || ||||| Sbjct 135322 GCCGGTACGTTTACTTTGAACAAATTAAAGTGCTTAAAGCAGACTATCCTCGCCTGAATA 135381 Query 122 ---CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC 178 ||| |||||||||||| |||||||| |||||||||||||||| | | Sbjct 135382 TTGCAT--GCATGGAATAATGAAATAGGACT--CGGTTCTATTTTGTTG------AACCC 135431 Query 179 CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238 || ||||||||||||||||| || || || | ||||| | |||||||||||||| Sbjct 135432 CGAGGTAATGATTAATAGGGACAGATGGAGGCATTCGTATTGCAACGTCAGAGGTGAAAT 135491 Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298 |||| ||| ||||| || |||||||| || |||| |||||||||||||| Sbjct 135492 TCTTAGATCGGCGCAAGACGGACAGAAGCGAAAGCATTTGCCAAAAATGTTTTCATTAAT 135551 Query 299 CAGTGAACGAAAGTTAGGGG 318 || |||||||||||| || Sbjct 135552 CA-AAAACGAAAGTTAGAGG 135570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915160289472