Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq3783 127 9e-27 seq3511 91.5 6e-16 >seq3783 Length=109261 Score = 127 bits (140), Expect = 9e-27 Identities = 116/143 (81%), Gaps = 4/143 (3%) Strand=Plus/Plus Query 41 AGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATA 100 ||||| |||| ||| | |||||||||||||||| |||||| | | ||||| |||||||| Sbjct 80524 AGTCGGGTTGCTTGAG--TGCAGCTCTAAATGGGTGGTAAACTCCATCTAAGGCTAAATA 80581 Query 101 TTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| |||||||| |||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 80582 -CGACCACGAGACCGAGAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 80640 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 80641 AGAGAGTTCAAGAGTACGTGAAA 80663 >seq3511 Length=303053 Score = 91.5 bits (100), Expect = 6e-16 Identities = 89/113 (79%), Gaps = 5/113 (4%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || ||||||| ||||||||| ||||||||||||||| ||| |||| | | Sbjct 138681 AGAGCGTACACGTTGGGATCCGAAAGATAGTGAACTATGCCTGATCAGGACGAAGTC--A 138738 Query 614 GGAAACTCTGGTGGAGGCTC---GCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 ||||| ||| |||||| || | |||| ||||| ||| ||||||||||||| Sbjct 138739 GGAAATCCTGATGGAGGTTCCAGGTAGCGATTCTGACGTACAAATCGATCGTC 138791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079906928450