Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq3511 136 6e-30 seq1571 122 1e-25 >seq3511 Length=303053 Score = 136 bits (150), Expect = 6e-30 Identities = 101/117 (86%), Gaps = 6/117 (5%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||||||| || |||||||| |||||||||||||| |||| ||||| |||||||| Sbjct 135932 CTATTTAGCAGGCTAGAGTCTCGTTTGTTATCGGAATTAATCAGATAAATCGCTCCACCA 135873 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||| ||||||||| ||||| |||||||||||||| | |||||||||| Sbjct 135872 ACTAAGAACAGCCATGCAC--CCACC----GAATCAAGAAAGAGTTGTCAATCTGTC 135822 >seq1571 Length=308 Score = 122 bits (134), Expect = 1e-25 Identities = 91/104 (88%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 187 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 246 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||| | || |||| |||||| |||||||||||||| Sbjct 247 -CTCAATC-TCGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAG 288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796766507259