Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq3701 248 1e-63 seq4151 226 5e-57 >seq3701 Length=60266 Score = 248 bits (274), Expect = 1e-63 Identities = 198/236 (84%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | ||| |||| |||||| ||||||||||||||||| Sbjct 58065 TACTGAGCAGGATTACTATCGCAATGACTAGTCACTAGTAGGATAAAACTAACCTGTCTC 58006 Query 60 ATGACGGTCTAAACCCAGCTCAC-GTTCCCTATTAGTGGGTGAACAATCCAACGCTTACC 118 | |||| |||||||||||||| | ||||||| || | ||||||||||||| || ||| | Sbjct 58005 ACGACGATCTAAACCCAGCTCCCTGTTCCCTGTTGGCGGGTGAACAATCCGACCCTTGGC 57946 Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 |||||| |||| | |||||||||||| |||| |||||||||||||||||| | |||||| Sbjct 57945 GAATTCAGCTTTGTAATGATAGGAAGAACCGAAATCGAAGGATCAAAAAGCGATGTCGCT 57886 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 ||||||||||||| |||| ||| ||||||||||||||||||||||| || |||||| Sbjct 57885 ATGAACGCTTGGCCGCCAGAAGTCAGTTATCCCTGTGGTAACTTTTTTGACACCTC 57830 >seq4151 Length=117502 Score = 226 bits (250), Expect = 5e-57 Identities = 194/236 (82%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | ||| |||| |||||| ||||||||||||||||| Sbjct 107608 TACTGAGCAGGATTACTATCGCAATGACTAGTCACTAGTAGGATAAAACTAACCTGTCTC 107549 Query 60 ATGACGGTCTAAACCCAGCTCAC-GTTCCCTATTAGTGGGTGAACAATCCAACGCTTACC 118 | |||| |||||||||||||| | ||||||| || | ||||||||||||| || || | Sbjct 107548 ACGACGATCTAAACCCAGCTCCCTGTTCCCTGTTGGCGGGTGAACAATCCGACCTTTGGC 107489 Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 |||||| |||| | ||||||||||||||||| ||||||||||||||||| | |||| | Sbjct 107488 GAATTCAGCTTTGTAATGATAGGAAGAGCCGAAATCGAAGGATCAAAAAG--ATGTCGTT 107431 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 ||||||||||||| |||| ||| |||||||||||||||||| |||| || || ||| Sbjct 107430 ATGAACGCTTGGCCGCCAGAAGTCAGTTATCCCTGTGGTAAATTTTTTGACATCTC 107375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854362927584