Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq3296 246 1e-62 seq3701 172 2e-40 seq3986 170 6e-40 seq3658 158 4e-36 seq3537 145 2e-32 seq4119 141 3e-31 seq1462 136 1e-29 seq3850 131 5e-28 seq3866 129 2e-27 seq3518 127 7e-27 seq3511 125 2e-26 seq2066 109 2e-21 seq3744 104 8e-20 seq1826 102 3e-19 seq4151 96.9 1e-17 seq3783 75.2 4e-11 seq1524 75.2 4e-11 >seq3296 Length=562388 Score = 246 bits (272), Expect = 1e-62 Identities = 317/438 (72%), Gaps = 46/438 (11%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||| ||| ||||||| ||| | || |||||||||||||||||||| Sbjct 61748 CTTTTGCTCTATGAGAGGTTTCTGTCCTCGCTAAGCTGGCCTTAGGACACCTGCGTTATC 61689 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| | ||||||| |||||||||| |||| || |||| || | |||||| Sbjct 61688 -TTTGACAGATGTACTGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAATCGGATC 61630 Query 127 G-GC-----------CCGCGA-------AGGACCTTA----ACGCC-------AGAAAAT 156 || | |||| ||| | || |||| |||| | Sbjct 61629 ACGCGGGAGTATCATCGGCGATTGGCCGAGGCCATTCTGATACGCTTGGCTCTAGAACAC 61570 Query 157 GGTCGGTG----AAGACCA----------GTTCCGCTTCATTGATTAAGTaaaaaaaCGA 202 | ||| | ||| || | ||||| | || ||||||| |||||| Sbjct 61569 CGCCGGGGCACGAAGCCCTCGGGGCACGCGCTCCGCCAAACCGAGTAAGTAAGGAAACGA 61510 Query 203 TAAGGGTAGTGGTATTTCACTTGCGCCGAAACGG-CTCCCACTTATTCTACACCTCTCAA 261 | | ||| || ||||||||| ||| | || ||||||||||| |||||||||||| Sbjct 61509 TGAAAGTAATGATATTTCACTGGCGATGTTACCATCTCCCACTTATGCTACACCTCTCAT 61450 Query 262 GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTC 321 ||| || ||| | | |||||||||||||||||||||||||||||||||||||| ||| Sbjct 61449 GTCTCTTTACAGTGCCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTAATTT 61390 Query 322 CGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATC 381 ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||| Sbjct 61389 TTCCAAGCCCGTTCCCTTGGCAGTGATTTCGCTAGATAGTAGATAGGGACAGCGGGAATC 61330 Query 382 TCGTTAATCCATTCATGC 399 ||||||||||||||| || Sbjct 61329 TCGTTAATCCATTCACGC 61312 >seq3701 Length=60266 Score = 172 bits (190), Expect = 2e-40 Identities = 98/100 (98%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 20236 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGTTTGAATTTCTTCACGTT 20177 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||||||| Sbjct 20176 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 20137 Score = 107 bits (118), Expect = 6e-21 Identities = 65/69 (94%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 |||| ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||| Sbjct 50892 ATAGAGACAGAGGGAATCTCGTTAATCCATTCATGGGCGTCACTAATTAGATGATGAGGC 50833 Query 424 ATTTGGCTA 432 ||||||||| Sbjct 50832 ATTTGGCTA 50824 >seq3986 Length=20712 Score = 170 bits (188), Expect = 6e-40 Identities = 99/102 (97%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 6171 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACG 6230 Query 492 TTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||| |||||||||||||| Sbjct 6231 TTGACATTCAGAGCACTGGGCAGAAATTACATTGCGTCAACA 6272 Score = 123 bits (136), Expect = 8e-26 Identities = 73/76 (96%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5422 TAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 5481 Query 421 GGCATTTGGCTACCTT 436 |||||||||| | ||| Sbjct 5482 GGCATTTGGCCAACTT 5497 >seq3658 Length=16443 Score = 158 bits (174), Expect = 4e-36 Identities = 95/99 (96%), Gaps = 1/99 (1%) Strand=Plus/Minus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 2717 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGTTG 2658 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||| ||||||||||| |||||||||||| Sbjct 2657 ACATTCAGAGCACT-GGCAGAAATCATATTGCGTCAACA 2620 Score = 129 bits (142), Expect = 2e-27 Identities = 73/74 (99%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 6792 AGTAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 6733 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 6732 GAGGCATTTGGCTA 6719 >seq3537 Length=345816 Score = 145 bits (160), Expect = 2e-32 Identities = 94/102 (92%), Gaps = 1/102 (1%) Strand=Plus/Minus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 |||||||||||||||||||||| ||| ||||||||||||| |||||||||||||| | Sbjct 92459 CCTTAAGAGAGTCATAGTTACTTTAGCCATTTACCCGCGCTTACTTGAATTTCTTCACGT 92400 Query 493 TGACATTCAGAGCACTGGGCAGAAATCA-CATTGCGTCAACA 533 |||||||||||||||||||||||||||| ||||||||||||| Sbjct 92399 TGACATTCAGAGCACTGGGCAGAAATCATCATTGCGTCAACA 92358 Score = 111 bits (122), Expect = 5e-22 Identities = 69/74 (93%), Gaps = 4/74 (5%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 96005 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCAT----GCGCGTCACTAATTAGATGAC 95950 Query 419 GAGGCATTTGGCTA 432 ||||||||||| || Sbjct 95949 GAGGCATTTGGTTA 95936 >seq4119 Length=163377 Score = 141 bits (156), Expect = 3e-31 Identities = 91/99 (92%), Gaps = 3/99 (3%) Strand=Plus/Minus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 |||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||| Sbjct 21072 TTAAGAGAGTCATAGTTACTCCCGCCATTTACCCGCGCTTGCTTGAATTTCTTCACGTTG 21013 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 | ||||||||||||| ||||| ||||||||||||||| Sbjct 21012 ATATTCAGAGCACTG---AGAAAGCACATTGCGTCAACA 20977 Score = 100 bits (110), Expect = 9e-19 Identities = 64/70 (91%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||| ||||||| || ||||||||||||||| ||||||||||||||||||||||||||| Sbjct 21402 AGTAAATAGGGATAGCGGGAATCTCGTTAATTCATTCATGCGCGTCACTAATTAGATGAT 21343 Query 419 GAGGCATTTG 428 | |||||||| Sbjct 21342 GGGGCATTTG 21333 >seq1462 Length=294 Score = 136 bits (150), Expect = 1e-29 Identities = 111/135 (82%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 |||||||||| || ||||||||| ||| | ||| | | |||||||||||||||||| Sbjct 1 TCCCACTTATGCTTCACCTCTCATGTCTCCTTACAGTGCCAAACTAGAGTCAAGCTCAAC 60 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 | | ||||||||||||||| ||| |||| ||| || |||| | |||||||||||||| Sbjct 61 AAGTTCTTCTTTCCCCGCTAATTTTTCCAATCCCATTTCCTTCTCAGTGGTTTCGCTAGA 120 Query 358 TAGTAGATAGGGACA 372 ||||||||||||||| Sbjct 121 TAGTAGATAGGGACA 135 >seq3850 Length=64201 Score = 131 bits (144), Expect = 5e-28 Identities = 89/100 (89%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||||||||||| |||| |||||||||||| |||||||| |||||||||||||| || Sbjct 51947 CTTAAGAGAGTCATTGTTATTCCCGCCGTTTATTCGCGCTTGCTTGAATTTCTTCACGTT 52006 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||| | ||||||||| ||||| ||||| Sbjct 52007 GACATTCAGAGCACTAGACAGAAATCATATTGCACCAACA 52046 Score = 100 bits (110), Expect = 9e-19 Identities = 67/74 (91%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||| |||||||| |||| ||||||| ||||||||||||||||||| Sbjct 49152 AGTAGATAGGGACAGCGGGAATCT---TAATTCATTCATATGCGTCACTAATTAGATGAC 49208 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 49209 GAGGCATTTGGCTA 49222 >seq3866 Length=9619 Score = 129 bits (142), Expect = 2e-27 Identities = 73/74 (99%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2639 AGTAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 2698 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 2699 GAGGCATTTGGCTA 2712 >seq3518 Length=853565 Score = 127 bits (140), Expect = 7e-27 Identities = 168/230 (73%), Gaps = 11/230 (5%) Strand=Plus/Plus Query 205 AGGGTAGTGGTATTTCACTTGCGCCGAAACGG-CTCCCACTTATTCTACACCTCTCAAGT 263 || |||||| ||||||||| ||| || |||| |||||| ||||| || ||| | Sbjct 133134 AGTGTAGTGATATTTCACTGGCGATATTACCATCTCCTACTTATGCTACATCTATCATAT 133193 Query 264 CATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCG 323 | || | | | |||||||||||| ||| ||| |||| ||||||| || ||| Sbjct 133194 CTCTTTATAGTACCAAACTAGAGTCAAGTTCATCAG--TCTTTTTTCCCCACTAATTTTT 133251 Query 324 CCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTC 383 ||| | | |||||||||| |||||||| |||||||||| | || ||| ||||||| Sbjct 133252 TCAAACTCATTCCCTTGGCAGTGGTTTCACTAGATAGTAC----GAACTGTGAGAATCTC 133307 Query 384 GTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAC 433 |||||| |||| ||||||| |||||||||||| | ||||| |||| Sbjct 133308 GTTAATTCATTTATGCGCG----TAATTAGATGACAAAACATTTAACTAC 133353 >seq3511 Length=303053 Score = 125 bits (138), Expect = 2e-26 Identities = 89/102 (87%), Gaps = 4/102 (4%) Strand=Plus/Minus Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491 ||| ||||||||||||||||||| ||||| ||||| |||||||| ||||| ||||| Sbjct 140051 ACCCTAAGAGAGTCATAGTTACTTCCGCCATTTACTCGCGCTTG----AATTTTTTCACG 139996 Query 492 TTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 || |||||||||| ||||||||||||||| |||||||||||| Sbjct 139995 TTAACATTCAGAGAACTGGGCAGAAATCATATTGCGTCAACA 139954 >seq2066 Length=406 Score = 109 bits (120), Expect = 2e-21 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||||||||||| |||| |||||||||||| |||||||| |||||||||||||| || Sbjct 75 CTTAAGAGAGTCATTGTTATTCCCGCCGTTTATTCGCGCTTGCTTGAATTTCTTCACGTT 16 Query 494 GACATTCAGAGCACT 508 ||||||||||||||| Sbjct 15 GACATTCAGAGCACT 1 >seq3744 Length=84293 Score = 104 bits (114), Expect = 8e-20 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 461 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 ||||||||||||||| |||||||| ||||| ||||||||||||||||| | ||||||||| Sbjct 33192 GTTTACCCGCGCTTGCTTGAATTTGTTCACGTTGACATTCAGAGCACTAGACAGAAATCA 33133 Query 521 CATTGCGTCAAC 532 |||||| ||||| Sbjct 33132 CATTGCATCAAC 33121 >seq1826 Length=345 Score = 102 bits (112), Expect = 3e-19 Identities = 94/118 (80%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||| ||||||| || |||| | ||||||||||||||||||| Sbjct 36 CTTTTGTTCTACGCGAGGTTTCTGTCTTCGCTGAG-CTGGCTTAGGACACCTGCGTTATA 94 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGA 124 |||||||||||| ||||||||| |||||||||| |||| | |||| || | |||| Sbjct 95 CTTTAACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGTAGTGTCCTCGAATCGGA 152 >seq4151 Length=117502 Score = 96.9 bits (106), Expect = 1e-17 Identities = 55/56 (98%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 377 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 99896 GAATCTCGTTAATCCATTCATGGGCGTCACTAATTAGATGACGAGGCATTTGGCTA 99841 Score = 93.3 bits (102), Expect = 1e-16 Identities = 71/84 (85%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 289 AAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGT 348 || ||||||| | ||||||||||||||| ||| |||| ||| || |||| | ||||| Sbjct 106977 AATCTCAACAAGTTCTTCTTTCCCCGCTAATTTTTCCAATCCCATTTCCTTCTCAGTGGT 106918 Query 349 TTCGCTAGATAGTAGATAGGGACA 372 |||||||||||||||||||||||| Sbjct 106917 TTCGCTAGATAGTAGATAGGGACA 106894 >seq3783 Length=109261 Score = 75.2 bits (82), Expect = 4e-11 Identities = 60/74 (81%), Gaps = 9/74 (12%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||| ||| || ||||||||||||||||||| | |||||||||||||| Sbjct 84249 AGTAGATAAGGATAGCGGGAATCTCGTTAATCCAT---------TTACTAATTAGATGAC 84199 Query 419 GAGGCATTTGGCTA 432 |||||||||| ||| Sbjct 84198 GAGGCATTTGACTA 84185 >seq1524 Length=301 Score = 75.2 bits (82), Expect = 4e-11 Identities = 60/74 (81%), Gaps = 9/74 (12%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||| ||| || ||||||||||||||||||| | |||||||||||||| Sbjct 165 AGTAGATAAGGATAGCGGGAATCTCGTTAATCCAT---------TTACTAATTAGATGAC 115 Query 419 GAGGCATTTGGCTA 432 |||||||||| ||| Sbjct 114 GAGGCATTTGACTA 101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635129048672