Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq4151 324 4e-86 seq3701 306 1e-80 seq3511 262 1e-67 seq3760 242 1e-61 seq3105 77.0 1e-11 >seq4151 Length=117502 Score = 324 bits (358), Expect = 4e-86 Identities = 384/509 (75%), Gaps = 45/509 (9%) Strand=Plus/Minus Query 29 GAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGC 88 ||| || ||||| ||||| | ||||||||||||||||| ||||| || |||||||||| Sbjct 109631 GAGACCCGTATCGTTATTTTTCGTCACTACCTCCCCGTGCCGGGAGTGAGTAATTTGCGG 109572 Query 89 GCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACC 148 |||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 109571 GCCTGCTGCCTTCCTTGGAT------GCCGTTTCTCAGGCTCCTTCTCCGGAATCGAACC 109518 Query 149 CTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGAT 208 || ||||||||||||||||| | | |||||||||| | ||||||||||| ||||||| Sbjct 109517 CTGATTCCCCGTTACCCGTT-ACAACATGGTAGGCGCAAAACCTACCATCGACAGTTGAT 109459 Query 209 AGGGCAGAAATTTGAATGAACCATCGCCG--GCTCAAGGCCATGCGAT--TCGTTAAGTT 264 | |||| | ||||||| || | |||||| ||| ||| || |||||| | ||||| Sbjct 109458 AAGGCAAACATTTGAAAGATGCGTCGCCGATGCT-AAGACCGTGCGATCAGCACAAAGTT 109400 Query 265 ATTATGAATCACC--AAGGAGCCCCGAAGGGCG---------TTG----GTTTTTTATCT 309 ||| |||||||| || | | || || | || ||| |||| Sbjct 109399 ATTCAGAATCACCAAAATAAACGGTAAACGGGGGACAACCACCTGCCACCGATTTGATCT 109340 Query 310 AATAAATACACCCCTTC---CG-AAGTCGGG---GTTTTTAGCATGTATTAGCTCTAGAA 362 |||||| || || ||| || |||||| | ||| |||| |||||||| ||||| Sbjct 109339 AATAAAAACGTCCGTTCTCTCGCTGGTCGGGACTCTATTTTGCAT-TATTAGCTTTAGAA 109281 Query 363 TTACCACGGTT--ATCCATGTAGTAA---GGTACTATCAAATAAACGATAACTGATTTAA 417 ||| ||| ||| |||||| ||||| ||||| ||| ||| ||| ||||||||||||| Sbjct 109280 TTATCACAGTTCCATCCATTAAGTAAATGGGTACAATCTAATGAACCATAACTGATTTAA 109221 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGATT--GCTTATACTTAGACATGCATGGCTTAAT 475 |||||||||||| ||||| | || ||| || | | | ||||||||||| |||||| Sbjct 109220 TGAGCCATTCGCGATTTCATTTTA---ATTCGGCATGCATTGAGACATGCATGACTTAAT 109164 Query 476 CTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||| || |||||| Sbjct 109163 TTTTGAGACAAGCATATGAATATTGGCAG 109135 >seq3701 Length=60266 Score = 306 bits (338), Expect = 1e-80 Identities = 380/512 (74%), Gaps = 49/512 (10%) Strand=Plus/Minus Query 29 GAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGC 88 ||| || ||||| ||||| | ||||||||||||||||||||||| || |||||||||| Sbjct 60264 GAGACCCGTATCGTTATTTTTCGTCACTACCTCCCCGTGTCGGGAGTGAGTAATTTGCGG 60205 Query 89 GCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACC 148 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 60204 ACCTGCTGCCTTCCTTGGAT------GCCGTTTCTCAGGCTCCTTCTCCGGAATCGAACC 60151 Query 149 CTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGAT 208 || ||||||||||||| ||| | | ||||||| || | ||||||||||| ||||||| Sbjct 60150 CTGATTCCCCGTTACCTGTT-ACAACATGGTAAGCGCAAAACCTACCATCGACAGTTGAT 60092 Query 209 AGGGCAGAAATTTGAATGAACCATCGCCG--GCTCAAGGCCATGCGAT--TCGTTAAGTT 264 | |||| | ||||||| || | |||||| ||| ||| || |||||| | || || Sbjct 60091 AAGGCAAACATTTGAAAGATGCGTCGCCGATGCT-AAGACCGTGCGATCAGCACAAAATT 60033 Query 265 ATTATGAATCACCAA----------------GGAGCCCCGAAGGGCGTTGGTTTTTTATC 308 | | |||||||||| || | | | || | ||| ||| Sbjct 60032 ACTCAGAATCACCAAAATAAACGGTAAACGGGGGACAACCACCCGCCACCG-ATTTGATC 59974 Query 309 TAATAAATACACCCCTTC---CG-AAGTCGGG---GTTTTTAGCATGTATTAGCTCTAGA 361 ||||||| || | ||| || |||||| | ||| |||| |||||||| |||| Sbjct 59973 TAATAAAAACGTCTGTTCTCTCGCTGGTCGGGACTCTATTTTGCAT-TATTAGCTTTAGA 59915 Query 362 ATTACCACGGTT--ATCCATGTAGTAA-----GGTACTATCAAATAAACGATAACTGATT 414 |||| ||| ||| |||||| ||||| ||||| ||| ||| ||| |||||||||| Sbjct 59914 ATTATCACAGTTCCATCCATTAAGTAAATGTGGGTACAATCTAATGAACCATAACTGATT 59855 Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATT--GCTTATACTTAGACATGCATGGCTT 472 ||||||||||||||| ||||| | || ||| || | ||| ||||||||||| ||| Sbjct 59854 TAATGAGCCATTCGCGATTTCATTTTA---ATTCGGCATGCACTGAGACATGCATGACTT 59798 Query 473 AATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||| || |||||| Sbjct 59797 AATCTTTGAGACAAGCATATGAATATTGGCAG 59766 >seq3511 Length=303053 Score = 262 bits (290), Expect = 1e-67 Identities = 379/527 (72%), Gaps = 52/527 (10%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| |||||| || | | || || ||||| ||||| | ||||||||| Sbjct 135068 GTACTCATTCCGATTACAGAGCCTTGGATGAATCCCGTATCGTTATTTTTCGTCACTACC 135009 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG-CCG 118 |||||||| ||| | | |||||||| | ||||||||||||| ||||||||||||| || Sbjct 135008 TCCCCGTGCCGGAAGCGTGTAATTTGTGTGCCTGCTGCCTTCTTTGGATGTGGTAGACCA 134949 Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178 ||||||||||| | | |||| |||||||| || |||||||||||| ||||||| Sbjct 134948 TTTCTCAGGCTTCTTTTCCGAAATCGAACTCTGATTCCCCGTTAC-------AACCATGG 134896 Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 ||||| | ||||||||||| |||||||| ||||| ||||||| || | ||||||| Sbjct 134895 TAGGCGCAGAACCTACCATCGACAGTTGATAAGGCAG--ATTTGAAAGATGCGTCGCCGG 134838 Query 239 CTC-AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACC-------AAGGAGCCCCG 288 | ||| || |||||| | |||||||| || ||||| | || | | Sbjct 134837 TGCTAAGACCGTGCGATCAACTCAAAGTTATTCAGAGTCACCGGAATAAACGGTAGACAG 134778 Query 289 AAGGGCGTTGG---------TTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTT 339 | || | | || |||||||||| | || |||| | |||| | Sbjct 134777 ACGGACAACCGCCCGCCACCGATTGGATCTAATAAAAGCGTCCATTCC-ATCACGGGAT- 134720 Query 340 TTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTACTATCA 396 | |||||||||||||||||||| ||| |||||||| ||| || ||||| ||| Sbjct 134719 ----GTATGTATTAGCTCTAGAATTATCACAGTTATCCAAGTAAATGT-GGGTACAATCT 134665 Query 397 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT--GCTTATA 454 | ||| ||||||||||||||||||||| |||||| | | ||| || | || Sbjct 134664 A-------ATATCTGATTTAATGAGCCATTCGCGGTTTCA---TCTTAATTCGGCATGTA 134615 Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGG 501 | ||||||||||||||||||||||| ||||||||||| ||||| || Sbjct 134614 TTGAGACATGCATGGCTTAATCTTTGGGACAAGCATATAACTACAGG 134568 >seq3760 Length=104636 Score = 242 bits (268), Expect = 1e-61 Identities = 387/544 (71%), Gaps = 51/544 (9%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| | || |||| ||| || ||||| |||| | || ||| | Sbjct 7934 GTACTCATTCCGATTACGGGGCCTCAAATGAGTCCCGTATCGTGATTTTTCATCTCTATC 7875 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 || ||||| |||| |||||||||||||||| |||||||||| |||||||| ||||||| Sbjct 7874 TCTCCGTGCCGGG--TGGGTAATTTGCGCGCTTGCTGCCTTCTTTGGATGTAGTAGCCGC 7817 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||||||| | ||||||||||||| || ||||||| ||| ||| |||||||| Sbjct 7816 TTCTCAGGCT--CGCTCCGGAATCGAATTCTGATTCCCCATTATTTGTTACAACCATGGT 7759 Query 180 AGGCCACTATCCTACC-ATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG- 237 || | |||||| ||||| |||||||| |||| ||||||| || | |||||| Sbjct 7758 AGATGTAAAACCTACCTATCGACAGTTGATAAAACAGACATTTGAAAGATTCGTCGCCGG 7699 Query 238 -GCT------CAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA--------- 279 ||| ||| || |||||| | ||||||||| || ||||||| Sbjct 7698 TGCTTAGCACAAAGACCGTGCGATCAGCACAAAGTTATTA-GAGTCACCAAAATAAACTG 7640 Query 280 --GGAGCCCCGA----AGGGCG-------TTGGTTTTTTATCTAATAAATACACCCCTTC 326 || | | || || || |||| || | |||||| | | || || Sbjct 7639 TGGGCGGACGGACAACAGTACGCCACCGATTGG-TTCTAATCTAAAGCGTTCCTTCCATC 7581 Query 327 CGAAGTCGGG---GTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA- 382 |||||| | ||| |||||||| |||| |||||||| || |||||||| ||| Sbjct 7580 ACTGGTCGGGACTCTGTTTTGCATGTATCAGCTGTAGAATTAGTACAGTTATCCAAGTAA 7521 Query 383 --GTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGT 440 || ||||| ||| ||| || |||||||||||| |||||||||| ||||||| | Sbjct 7520 ATGT-GGGTACAATCTAATGAATTATAACTGATTTA---AGCCATTCGCGGTTTCACCTT 7465 Query 441 ATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTG 500 | | | || | ||| | |||||||||||||||| || ||||||||||||||||||||| Sbjct 7464 A-ATTTGGCACACACTGAAACATGCATGGCTTAATTTTCGAGACAAGCATATGACTACTG 7406 Query 501 GCAG 504 | || Sbjct 7405 GTAG 7402 >seq3105 Length=3863317 Score = 77.0 bits (84), Expect = 1e-11 Identities = 45/47 (96%), Gaps = 0/47 (0%) Strand=Plus/Minus Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct 250216 AGACATACATGACTTAATCTTTGAGACAAGCATATGACTACTGGCAG 250170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510334463744