Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3973 111 1e-19 seq2857 109 4e-19 >seq3973 Length=340871 Score = 111 bits (122), Expect = 1e-19 Identities = 127/168 (76%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTT-ATTGGAACG 61262 ||||| || || |||||||||||||| || |||||||| ||||||||| | |||| | Sbjct 474 CATGTCTTAGCATTCTTTGCCGCTTCCGATGGTATCGTTAATGAGAATCTGATTGAGAAA 415 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 || || || || ||| || | | || || ||||||||||| ||||| || |||||||| Sbjct 414 TTCAGC-CAAGAAGTGAAAATTCCCGAAGCACGTTGTTTCTATGGCTTTCAAATTGCCAT 356 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370 || ||| | || || ||||||||| | | ||||| || || || || Sbjct 355 AGAAAATATTCATTCTGAGATGTACTCTTTGCTCATTGAAACTTATAT 308 >seq2857 Length=5407 Score = 109 bits (120), Expect = 4e-19 Identities = 159/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 || || ||||| || ||||| | || |||| | ||| || ||||||| || ||| Sbjct 4850 TTATTTAATGCGATTGAGACACTTCCTTGTGTGAGGAAGAAGGCTAATTGGGCATTAAAT 4791 Query 61456 TGGATCAC-CAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGA 61514 ||||||| || | | | |||| ||| ||||| | | |||||||||| ||| || Sbjct 4790 TGGATCAATCACGAGAGTG-CTACGTTTCCCGAACGTGTAGTCGCATTTGCGGCGGTTGA 4732 Query 61515 GGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTAT 61574 |||| | || |||||||| || || || || |||||| | |||||||| ||| | || Sbjct 4731 GGGTATCTTCTTCAGTGGCAGTTTCGCAGCCATTTTTTGGCTAAAGAAACGAGGAGTCAT 4672 Query 61575 GCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 ||| ||||| ||||||||||| || | || || || ||||| Sbjct 4671 GCCAGGTCTCACCTTCAGCAACGAACTTATCTCGCGAGACGA 4630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397546975982960