Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_033055.1 Length=12513 Score E Sequences producing significant alignments: (Bits) Value seq3105 104 2e-18 >seq3105 Length=3863317 Score = 104 bits (114), Expect = 2e-18 Identities = 262/388 (68%), Gaps = 14/388 (4%) Strand=Plus/Minus Query 8254 TTAAAATTATCAGAAACATGGATCTCCAAGAACTTATTTGAGTATGGTAAAGTAAGGTAT 8313 |||||||| | ||||||||| | || | | || | ||| | | ||| |||| ||| Sbjct 2898788 TTAAAATTGTTTGAAACATGGTTTTCAATCAGATTTTGTGAATTCGAAAAAATAAGATAT 2898729 Query 8314 TATAAAGGTGAAGCAATTAGT-CAGACAACAAAGAAGATCTCAAGATTAATACCTGATAT 8372 | | | || |||||||||||| ||| | ||||||||||| | ||| | || | ||||| Sbjct 2898728 TTTGATGGAGAAGCAATTAGTTCAG-CGACAAAGAAGATATACAGAATGATTTCAGATAT 2898670 Query 8373 TAATGATGGTATCAGCTCATTTATGTCCTCTCTCAGTACAATTAATACCATTACTGAGTC 8432 ||||||||| || ||||| | ||| | ||| | || |||||||| |||||||| || Sbjct 2898669 TAATGATGGCATTTGCTCAATAATGACATCTTTATCAACTATTAATACAATTACTGAATC 2898610 Query 8433 AGCCGCAAAGATGGATCACTGTCCGGATA--GCTGTTTTTTAATTAATTCGATT-AGTAT 8489 || || | ||| | ||| |||| ||| ||| ||| ||| || ||| ||| Sbjct 2898609 CCAAGCGAAATTCGATTATACTCCTGATAATGCT-TTTATTA--TAAATCAATTCCATAT 2898553 Query 8490 TTTAAATTATCTAATGAGAAGAAAAATAATACATCAAGATACACCATCACCTGTAT---G 8546 ||||||||||| |||| |||| | | || || | | | ||| ||| || | Sbjct 2898552 ATTAAATTATCTGCAGAGACAAAAAGTTCTTAATGAA-AAAGATCATATTCTGGATTGGG 2898494 Query 8547 TTTTATGTATTTATGCTATCCATCTGATTTCGGTGGGATAAGTTTGTCACATTATTTCTC 8606 | || ||| | ||| ||| ||||| ||||| |||| | || ||| || || Sbjct 2898493 AATAATTCCTTTTT--TATTCATTAGATTTTGGTGGAATAACGCTTTCTACTTACTTTTC 2898436 Query 8607 TCACTATGTTCGAGGACATGAAGATAAA 8634 || |||||| || | |||| |||||| Sbjct 2898435 ACATTATGTTAGAAGTAATGATGATAAA 2898408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39924451042692