Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq3748 201 2e-49 >seq3748 Length=4031 Score = 201 bits (222), Expect = 2e-49 Identities = 193/248 (78%), Gaps = 11/248 (4%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||||||||| || |||||||| ||||| || || ||| Sbjct 708 CTTAACCTTCCAGCACCGGGCAGGCGTCAGCCCCTATACATCACCTTACGGT-TTAGCAG 650 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 ||||||||||||| ||||||||||||| |||||| ||||| |||| Sbjct 649 AGACCTGTGTTTTTGATAAACAGTCGCTTGGGCCTATTCACTGCG----------GCTCT 600 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 || | | | |||| | |||||||||||||||||||||||||| ||||||||||| Sbjct 599 TCAAGGCTTGCACCCTAAAAAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAG 540 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||||| | ||||| | || | |||||| |||||| | |||| |||||||||||| Sbjct 539 TTCCTTAACGAGAGTTCGCTCGCTCACCTTAGAATTCTCATCTTGACTACCTGTGTCGGT 480 Query 241 TTACGGTA 248 || ||||| Sbjct 479 TTGCGGTA 472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694239056525