Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq3748 109 6e-22 >seq3748 Length=4031 Score = 109 bits (120), Expect = 6e-22 Identities = 137/183 (75%), Gaps = 9/183 (5%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 ||||||| |||||| |||||| | ||| || |||||| | ||| ||| || || || Sbjct 475 CGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCG-TT 533 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCC---CTACCCAGAAA- 136 |||||||| |||||| |||||| |||||||||||| || |||| | || | || Sbjct 534 AAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTTTTTAGGGTGCAAG 593 Query 137 --TGGGAG-GGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGC 193 | | || | ||||| ||||||| ||| || |||||||| |||||||||||| || ||| Sbjct 594 CCTTGAAGAGCCGCAGTGAATAGGCCCAAGCGACTGTTTATCAAAAACACAGGTCTCTGC 653 Query 194 CAA 196 || Sbjct 654 TAA 656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531076881950