Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq3748 138 3e-30 >seq3748 Length=4031 Score = 138 bits (152), Expect = 3e-30 Identities = 178/247 (72%), Gaps = 14/247 (6%) Strand=Plus/Minus Query 169 AGCTTCGCGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCT 228 |||||||| |||||||| | | |||||||||| ||||||||||||||||| |||| Sbjct 733 AGCTTCGCAGAAGCTAACCACTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGCCCCT 674 Query 229 ATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTG 288 |||| || ||| || || |||||| |||||||||| |||||||||||| ||||| Sbjct 673 ATACATCACCTTACGGTTTAGCAGAGACCTGTGTTTTTGATAAACAGTCGCTTGGGCCTA 614 Query 289 GTATCTTCGACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCT 348 | || || | ||| |||| | | |||||| | || | |||||| Sbjct 613 TTCACTGCG--------GCTCTT------CAAGGCTTGCACCCTAAAAAGCACCCCTTCT 568 Query 349 CCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGG 408 ||||||||||||| | | ||||||| |||||||| | |||||| ||| | |||| | Sbjct 567 CCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACGAGAGTTCGCTCGCTCACCTTAG 508 Query 409 TATTCTC 415 |||||| Sbjct 507 AATTCTC 501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260498353600