Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= AAMG01001161.1 Length=375 Score E Sequences producing significant alignments: (Bits) Value seq2897 75.2 2e-11 >seq2897 Length=5060 Score = 75.2 bits (82), Expect = 2e-11 Identities = 101/136 (74%), Gaps = 6/136 (4%) Strand=Plus/Minus Query 243 GTCCTGGCGATAAAAGCGGCTG--AGTTGGGCG-TACACCTGTGGATAACGATTGACCAG 299 ||||||||||||||| | |||| ||| |||| |||| | || | |||| |||| Sbjct 5056 GTCCTGGCGATAAAA-CTGCTGTAAGT--GGCGATACATCGCAGGGAAGCGATCCGCCAG 5000 Query 300 TAAATCCGGGGCGCTGAAAAAGTATTCGCTGGTGACGGCAAAGAACTCCGCCGGGTTTTC 359 |||||| ||||||||||||||||| || ||||||||| |||| || || | Sbjct 4999 TAAATCTGGGGCGCTGAAAAAGTACTCCGACAGCACGGCAAAGCACTCGGCGGGATCGCT 4940 Query 360 GGCGGCGTAGGGGTCG 375 |||||||||||| ||| Sbjct 4939 GGCGGCGTAGGGATCG 4924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1097337399200