Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1520 289 5e-76 >seq1520 Length=10308 Score = 289 bits (320), Expect = 5e-76 Identities = 234/278 (84%), Gaps = 4/278 (1%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||| Sbjct 7031 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 6974 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| Sbjct 6973 GCCGCGAAGCTACCATCTGCTGGATAATAGCTGAACGCCTCTAAGTTAGAATCCATGCCA 6914 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 |||||||| |||| ||||| |||| ||||| |||||||||||||||||||||||| || Sbjct 6913 GAACGGGGCGATTTTCTCCAGCACGTCGTACGAGGATACGAATAGGCTTCGGCCCCGGAC 6854 Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCA 240 ||||||||| | ||| || || |||| || | | | | || ||||| ||| Sbjct 6853 CTTAGCAGGGC-ATAACTCCTCTCTCGTAGAAGTCGGGAGAGGT-AATTGCCGGATAGCA 6796 Query 241 ATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||| || |||| ||||| ||||||||||||||||| Sbjct 6795 ATTTGACAGCGCGCTGGGATGAATCCTTTGCAGACGAC 6758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819010131200