Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq35 118 8e-22
>seq35
Length=1961283
Score = 118 bits (130), Expect = 8e-22
Identities = 160/223 (72%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455
|| || ||||| || || || || ||| || || ||| || |||||||| | ||
Sbjct 1196910 TTATTTAATGCTATTGAAACCATGCCGTGTGTAAAAAAGAAGGCAGATTGGGCTCTTAAA 1196969
Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515
||||||| || | || || ||||||||| | || | |||||||| | || ||
Sbjct 1196970 TGGATCAGTGATAGTAAAGCAACTTTTGGTGAAAGGTTAGTTGCATTTGCTGCAGTTGAA 1197029
Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575
||| |||||||| |||| ||||| ||| | ||||||||||||||| | ||| | |||
Sbjct 1197030 GGTATATTTTTCTCTGGAAGTTTTGCTGCATTATTTTGGTTGAAGAAAAGAGGATTAATG 1197089
Query 61576 CCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618
|| ||| | || || ||||||||| |||| ||| | || ||||
Sbjct 1197090 CCAGGTTTAACTTTTAGCAATGAGCTGATTTCAAGAGATGAGG 1197132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397452074762000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |