Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_011356.1
Length=54896
Score E
Sequences producing significant alignments: (Bits) Value
seq2959 293 8e-75
>seq2959
Length=4395
Score = 293 bits (324), Expect = 8e-75
Identities = 461/647 (71%), Gaps = 16/647 (2%)
Strand=Plus/Minus
Query 13655 GCGCGGGGTATTGATTTTCTCAATGGAAATGAGCGCATTGCAGATTGCAGAGCGA-AGCA 13713
|||||| || |||||||| ||||||||| ||| ||||||| ||||| |||
Sbjct 1110 GCGCGGCGTGCTGATTTTCAGCATGGAAATGGACGCTAATCAGATTGTGGAGCGCCAGC- 1052
Query 13714 TTGCCAACGCCGGGAGGATGTCGGTTAGCGTACTGCGAAATCCTGCATCGATGGATGACG 13773
|||| || || | |||| || | |||||||||||| ||| ||||| ||||
Sbjct 1051 TTGCAGGAGCAGGAAACTTGTCAGTGTCGGCACTGCGAAATCCAGCACAAATGGACGACG 992
Query 13774 AGGGCTGGGCACGTGTTGCTAACGGCATGAGTCAGCTTGCA-GATTTGGATGTATGGGTA 13832
| ||||||||| || | || ||| | || |||| ||| | || |||||| |
Sbjct 991 AAGGCTGGGCAAAAGTCACCGCTGGAATGGGA-AGATTGCTTGATCTCGACGTATGGATT 933
Query 13833 GTCGATGCTT-CGCGGTTATCGGTCGAAGAAATACGCTCAATCGCAGAACGGCATAAGCA 13891
|| || || | | | | || | || | || ||| | ||||| ||||| || ||||
Sbjct 932 GTGGACGCCAGCAAGATGAACG-TGGAGCAGATCCGCGCCATCGCCGAACGTCACAAGCG 874
Query 13892 GGAAAATCCAAACCTGTCACTCATCATGGCGGATTATCTTGGCCTGATTGAGAAGCCGAA 13951
| || || || || |||||| | | || || || ||||||||||| ||||| ||
Sbjct 873 CAACAACCCGGCACTATCGCTCATCCTTGTTGACTACCTCGGCCTGATTGACAAGCCAAA 814
Query 13952 AGCAGACCGCAACGACCTCGCAATTGCTCACATCTCCGGAAGCCTGAAGGCGATGGCGAA 14011
||||||||||||||||| || || || ||||||||||| ||||||||| ||||| ||
Sbjct 813 GGCAGACCGCAACGACCTGGCGATCGCGCACATCTCCGGCAGCCTGAAGCGCATGGCAAA 754
Query 14012 AGACCTGAAAACACCGGTTATCTCCCTGAGTCAGCTTTCGCGCGATGTTGAGAAGCGACC 14071
||| || ||||| || ||||| || || |||||||| || ||||||||||| ||||| ||
Sbjct 753 AGATCTCAAAACGCCTGTTATGTCGCTTAGTCAGCTATCCCGCGATGTTGAAAAGCGCCC 694
Query 14072 AA----ACA--AACGCCCGACAAACGCAGATTTGCGTGATTCAGGAAGCATTGAACAGGA 14125
| ||| || ||||| ||||| ||| |||| || || ||||||||||| |||||
Sbjct 693 GAAAGGACAGCGCCGACCGACCAACGCCGATCTGCGCGACTCGGGAAGCATTGAGCAGGA 634
Query 14126 CGCAGACTCAATCATCATGCTCTATCGGGAAGCGGTATATGATG-AGAA-CAGTAGCGCC 14183
||| ||| |||||||||||||| || ||||| || ||||| | |||| | | ||
Sbjct 633 CGCCGACAGCATCATCATGCTCTACCGCGAAGCTGTGTATGACGAAGAATCCCCA--GCT 576
Query 14184 GCGCCATTTGCTGAAATCATCGTGACGAAAAACCGTTTTGGCTCGCTTGGTACAGTTTAC 14243
||| || || ||||||||||| || |||||||| || || ||| || || || |||
Sbjct 575 GCGAAGTTGGCAGAAATCATCGTCACCAAAAACCGCTTCGGGCAGCTCGGCACTGTCTAC 516
Query 14244 CAGCGGTTCTGTAACGGACACTTTGTTGCATGTGACCAGGATGAAGC 14290
||| ||| |||||| || ||| || |||||||| |||||
Sbjct 515 CAGGCTTTCAATAACGGGCATTTTCAGCCAACGGACCAGGAAGAAGC 469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 175495725849300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |