Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_011356.1 Length=54896 Score E Sequences producing significant alignments: (Bits) Value seq2959 293 8e-75 >seq2959 Length=4395 Score = 293 bits (324), Expect = 8e-75 Identities = 461/647 (71%), Gaps = 16/647 (2%) Strand=Plus/Minus Query 13655 GCGCGGGGTATTGATTTTCTCAATGGAAATGAGCGCATTGCAGATTGCAGAGCGA-AGCA 13713 |||||| || |||||||| ||||||||| ||| ||||||| ||||| ||| Sbjct 1110 GCGCGGCGTGCTGATTTTCAGCATGGAAATGGACGCTAATCAGATTGTGGAGCGCCAGC- 1052 Query 13714 TTGCCAACGCCGGGAGGATGTCGGTTAGCGTACTGCGAAATCCTGCATCGATGGATGACG 13773 |||| || || | |||| || | |||||||||||| ||| ||||| |||| Sbjct 1051 TTGCAGGAGCAGGAAACTTGTCAGTGTCGGCACTGCGAAATCCAGCACAAATGGACGACG 992 Query 13774 AGGGCTGGGCACGTGTTGCTAACGGCATGAGTCAGCTTGCA-GATTTGGATGTATGGGTA 13832 | ||||||||| || | || ||| | || |||| ||| | || |||||| | Sbjct 991 AAGGCTGGGCAAAAGTCACCGCTGGAATGGGA-AGATTGCTTGATCTCGACGTATGGATT 933 Query 13833 GTCGATGCTT-CGCGGTTATCGGTCGAAGAAATACGCTCAATCGCAGAACGGCATAAGCA 13891 || || || | | | | || | || | || ||| | ||||| ||||| || |||| Sbjct 932 GTGGACGCCAGCAAGATGAACG-TGGAGCAGATCCGCGCCATCGCCGAACGTCACAAGCG 874 Query 13892 GGAAAATCCAAACCTGTCACTCATCATGGCGGATTATCTTGGCCTGATTGAGAAGCCGAA 13951 | || || || || |||||| | | || || || ||||||||||| ||||| || Sbjct 873 CAACAACCCGGCACTATCGCTCATCCTTGTTGACTACCTCGGCCTGATTGACAAGCCAAA 814 Query 13952 AGCAGACCGCAACGACCTCGCAATTGCTCACATCTCCGGAAGCCTGAAGGCGATGGCGAA 14011 ||||||||||||||||| || || || ||||||||||| ||||||||| ||||| || Sbjct 813 GGCAGACCGCAACGACCTGGCGATCGCGCACATCTCCGGCAGCCTGAAGCGCATGGCAAA 754 Query 14012 AGACCTGAAAACACCGGTTATCTCCCTGAGTCAGCTTTCGCGCGATGTTGAGAAGCGACC 14071 ||| || ||||| || ||||| || || |||||||| || ||||||||||| ||||| || Sbjct 753 AGATCTCAAAACGCCTGTTATGTCGCTTAGTCAGCTATCCCGCGATGTTGAAAAGCGCCC 694 Query 14072 AA----ACA--AACGCCCGACAAACGCAGATTTGCGTGATTCAGGAAGCATTGAACAGGA 14125 | ||| || ||||| ||||| ||| |||| || || ||||||||||| ||||| Sbjct 693 GAAAGGACAGCGCCGACCGACCAACGCCGATCTGCGCGACTCGGGAAGCATTGAGCAGGA 634 Query 14126 CGCAGACTCAATCATCATGCTCTATCGGGAAGCGGTATATGATG-AGAA-CAGTAGCGCC 14183 ||| ||| |||||||||||||| || ||||| || ||||| | |||| | | || Sbjct 633 CGCCGACAGCATCATCATGCTCTACCGCGAAGCTGTGTATGACGAAGAATCCCCA--GCT 576 Query 14184 GCGCCATTTGCTGAAATCATCGTGACGAAAAACCGTTTTGGCTCGCTTGGTACAGTTTAC 14243 ||| || || ||||||||||| || |||||||| || || ||| || || || ||| Sbjct 575 GCGAAGTTGGCAGAAATCATCGTCACCAAAAACCGCTTCGGGCAGCTCGGCACTGTCTAC 516 Query 14244 CAGCGGTTCTGTAACGGACACTTTGTTGCATGTGACCAGGATGAAGC 14290 ||| ||| |||||| || ||| || |||||||| ||||| Sbjct 515 CAGGCTTTCAATAACGGGCATTTTCAGCCAACGGACCAGGAAGAAGC 469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175495725849300