Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq1164 149 9e-34 seq979 96.9 5e-18 >seq1164 Length=20499 Score = 149 bits (164), Expect = 9e-34 Identities = 147/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 57 GCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCG 116 ||| || ||||||||||| || | ||||||||||| || || |||| ||||| ||||| Sbjct 1112 GCCGGGCGCCGGCGCTTCCTCGATGACCTTCTGGTGGCGGCGCTGCATGGAGCAGTCGCG 1053 Query 117 GTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACG 176 |||||||||||||| |||| ||| || ||||| || | || | ||||||||| || Sbjct 1052 CTCGCCCAGGTGGATCGCGTTGCCGTGCTGGTCGGCGAGGATCTGGATTTCCACGTGGCG 993 Query 177 TGGGTTGGTCAGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAACCAGGCGCCCGCTTC 236 ||||| ||| |||| |||| ||| ||||| ||||||||||| | ||||| || || Sbjct 992 CGGGTTTTCCAGAAACTTCTCCATGTAAACCATGGGGTTGCCGAAGAACGCGCCGGCCTC 933 Query 237 GGAGCGAGTC 246 |||||| ||| Sbjct 932 GGAGCGGGTC 923 >seq979 Length=39260 Score = 96.9 bits (106), Expect = 5e-18 Identities = 133/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 57 GCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCG 116 |||||| |||||||| ||||| | ||||||||||| || || |||| ||||| ||||| Sbjct 16582 GCCCGGCGCCGGCGCCTCTTCGATCACCTTCTGGTGGCGCCGCTGCATGGAGCAGTCGCG 16523 Query 117 GTCGCCCAGGTGGATGGCGTGGCCCTGGCC--GTCGGACAGTACTTGCACTTCCACGTGA 174 |||||||||| | |||| | || | ||| | ||| | || | || | ||| Sbjct 16522 CTCGCCCAGGTACACCGCGT--TCTTGAACTTGTCCGCCAGGATCTGGATCTCGATGTGG 16465 Query 175 CGTGGGTTGGTCAGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAACCAGGCGCCCGCT 234 || ||||| ||| |||| |||| ||| ||| ||| |||||||| ||| |||||| Sbjct 16464 CGCGGGTTCTGGAGGAACTTCTCCATGTACACCGCCGGATTGCCGAATGCGGCACCCGCT 16405 Query 235 TCGG 238 |||| Sbjct 16404 TCGG 16401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735966082590