Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= AAMG01001693.1 Length=610 Score E Sequences producing significant alignments: (Bits) Value seq989 87.8 7e-15 seq710 87.8 7e-15 seq606 87.8 7e-15 seq265 87.8 7e-15 >seq989 Length=77558 Score = 87.8 bits (96), Expect = 7e-15 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 228 CAGTATGCGAGTCGTTTATTTCGCCAGCGGCTGTGGCGTTATCGCATGCGCCAGAGCATG 287 || ||| | || ||| || |||||| | |||||||||||| || ||||| ||| Sbjct 69473 CACTATACCAGCCGTAAATACCGCCAGGTGTTGTGGCGTTATCAGATTAAGCAGAGTATG 69532 Query 288 AGTCGCCGGGGAAATTGCTGGGACAATGCGCCAATGGAGCGCGTGTTCCGCAGCTTGAAA 347 ||||| || || || || ||||| || || ||||| | | ||| | |||||||| Sbjct 69533 AGTCGGCGCGGTAACTGTTGGGATAACAGCCCGATGGAAAGGTTCTTCAGGAGCTTGAAG 69592 Query 348 ACGGAGTGGATACCGACCACGGGTTA 373 || |||||| |||||||||||||||| Sbjct 69593 ACTGAGTGGGTACCGACCACGGGTTA 69618 >seq710 Length=104226 Score = 87.8 bits (96), Expect = 7e-15 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 228 CAGTATGCGAGTCGTTTATTTCGCCAGCGGCTGTGGCGTTATCGCATGCGCCAGAGCATG 287 || ||| | || ||| || |||||| | |||||||||||| || ||||| ||| Sbjct 24925 CACTATACCAGCCGTAAATACCGCCAGGTGTTGTGGCGTTATCAGATTAAGCAGAGTATG 24984 Query 288 AGTCGCCGGGGAAATTGCTGGGACAATGCGCCAATGGAGCGCGTGTTCCGCAGCTTGAAA 347 ||||| || || || || ||||| || || ||||| | | ||| | |||||||| Sbjct 24985 AGTCGGCGCGGTAACTGTTGGGATAACAGCCCGATGGAAAGGTTCTTCAGGAGCTTGAAG 25044 Query 348 ACGGAGTGGATACCGACCACGGGTTA 373 || |||||| |||||||||||||||| Sbjct 25045 ACTGAGTGGGTACCGACCACGGGTTA 25070 Score = 87.8 bits (96), Expect = 7e-15 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 228 CAGTATGCGAGTCGTTTATTTCGCCAGCGGCTGTGGCGTTATCGCATGCGCCAGAGCATG 287 || ||| | || ||| || |||||| | |||||||||||| || ||||| ||| Sbjct 69330 CACTATACCAGCCGTAAATACCGCCAGGTGTTGTGGCGTTATCAGATTAAGCAGAGTATG 69389 Query 288 AGTCGCCGGGGAAATTGCTGGGACAATGCGCCAATGGAGCGCGTGTTCCGCAGCTTGAAA 347 ||||| || || || || ||||| || || ||||| | | ||| | |||||||| Sbjct 69390 AGTCGGCGCGGTAACTGTTGGGATAACAGCCCGATGGAAAGGTTCTTCAGGAGCTTGAAG 69449 Query 348 ACGGAGTGGATACCGACCACGGGTTA 373 || |||||| |||||||||||||||| Sbjct 69450 ACTGAGTGGGTACCGACCACGGGTTA 69475 >seq606 Length=129304 Score = 87.8 bits (96), Expect = 7e-15 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 228 CAGTATGCGAGTCGTTTATTTCGCCAGCGGCTGTGGCGTTATCGCATGCGCCAGAGCATG 287 || ||| | || ||| || |||||| | |||||||||||| || ||||| ||| Sbjct 116195 CACTATACCAGCCGTAAATACCGCCAGGTGTTGTGGCGTTATCAGATTAAGCAGAGTATG 116136 Query 288 AGTCGCCGGGGAAATTGCTGGGACAATGCGCCAATGGAGCGCGTGTTCCGCAGCTTGAAA 347 ||||| || || || || ||||| || || ||||| | | ||| | |||||||| Sbjct 116135 AGTCGGCGCGGTAACTGTTGGGATAACAGCCCGATGGAAAGGTTCTTCAGGAGCTTGAAG 116076 Query 348 ACGGAGTGGATACCGACCACGGGTTA 373 || |||||| |||||||||||||||| Sbjct 116075 ACTGAGTGGGTACCGACCACGGGTTA 116050 >seq265 Length=448903 Score = 87.8 bits (96), Expect = 7e-15 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 228 CAGTATGCGAGTCGTTTATTTCGCCAGCGGCTGTGGCGTTATCGCATGCGCCAGAGCATG 287 || ||| | || ||| || |||||| | |||||||||||| || ||||| ||| Sbjct 156274 CACTATACCAGCCGTAAATACCGCCAGGTGTTGTGGCGTTATCAGATTAAGCAGAGTATG 156215 Query 288 AGTCGCCGGGGAAATTGCTGGGACAATGCGCCAATGGAGCGCGTGTTCCGCAGCTTGAAA 347 ||||| || || || || ||||| || || ||||| | | ||| | |||||||| Sbjct 156214 AGTCGGCGCGGTAACTGTTGGGATAACAGCCCGATGGAAAGGTTCTTCAGGAGCTTGAAG 156155 Query 348 ACGGAGTGGATACCGACCACGGGTTA 373 || |||||| |||||||||||||||| Sbjct 156154 ACTGAGTGGGTACCGACCACGGGTTA 156129 Score = 87.8 bits (96), Expect = 7e-15 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 228 CAGTATGCGAGTCGTTTATTTCGCCAGCGGCTGTGGCGTTATCGCATGCGCCAGAGCATG 287 || ||| | || ||| || |||||| | |||||||||||| || ||||| ||| Sbjct 226072 CACTATACCAGCCGTAAATACCGCCAGGTGTTGTGGCGTTATCAGATTAAGCAGAGTATG 226013 Query 288 AGTCGCCGGGGAAATTGCTGGGACAATGCGCCAATGGAGCGCGTGTTCCGCAGCTTGAAA 347 ||||| || || || || ||||| || || ||||| | | ||| | |||||||| Sbjct 226012 AGTCGGCGCGGTAACTGTTGGGATAACAGCCCGATGGAAAGGTTCTTCAGGAGCTTGAAG 225953 Query 348 ACGGAGTGGATACCGACCACGGGTTA 373 || |||||| |||||||||||||||| Sbjct 225952 ACTGAGTGGGTACCGACCACGGGTTA 225927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1846309421963