Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= AAMG01001757.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq265 156 1e-35 >seq265 Length=448903 Score = 156 bits (172), Expect = 1e-35 Identities = 266/390 (68%), Gaps = 2/390 (1%) Strand=Plus/Minus Query 3 ACGTTCGGGCTCTGGAAGCCGACGTCATAGATGTGGAAGCCCAAGTGCATGATCTTCTGG 62 ||| | ||||| || || | | || ||||| ||||||| | |||||| | ||| | Sbjct 18028 ACGCTAGGGCTTTGAAACGCCATATCGTAGATCTGGAAGCTGAGGTGCATAAATTTCCGC 17969 Query 63 TCCAGGTGCAGGTAGGGGTAGTTCCCGTCCACTGGCAGCGACGGCGCCAGCTTCACNNNN 122 || |||||||| || ||| | | | || || |||||| |||| || ||||| Sbjct 17968 TCGAGGTGCAGATACGGGAAAATATCATCTACCGGCAGCACCGGCACCGATTTCACCACC 17909 Query 123 NNNNNNNNNNNNNNNNNCGCCACTTCACCGGCAGCGCGGGCCACGGCGAGGATCATGCCG 182 |||| ||| || || ||||| |||||||| || |||| ||| Sbjct 17908 CCCACCAGCATCAACGGCGCCGTTTCCCCCGCCGCGCGCGCCACGGCCAGAATCAACCCG 17849 Query 183 GTCGTCATGGCCGGGCTTGCCATGGGCAAGACGATCTTCCACAGCGTCTCGGCCTTGGTC 242 ||| |||| |||||| ||||| |||| || || ||||||||| || ||| ||| Sbjct 17848 GTCATCATCGCCGGGGCCGCCATCGGCAGCACAATGCGCCACAGCGTTTCCGCCCAGGTG 17789 Query 243 GCGCCCAAGGCCAGCGAGCCCTCGCGCACGGTACGC-GGAATACGCGCCAAACCTTCTTC 301 || |||| |||| ||| |||| ||||| | | || |||||||| | || ||||| || Sbjct 17788 GCTCCCAGCGCCAACGAACCCTGGCGCAGCG-AGGCAGGAATACGTGACAGCCCTTCCTC 17730 Query 302 GGTGGCCACGATCACCACCGGAACAGCCAGCAGTGCCAGGGTCAACGATGCCCACAGCAG 361 ||| ||||| ||||||||||| | | ||| | ||||| |||| || |||||||||| Sbjct 17729 GGTCGCCACAATCACCACCGGCAACGTCAGTAAGGCCAGCGTCAGCGCGGCCCACAGCAC 17670 Query 362 GTCCGGGGTACCCAAGGTCGGCGCCGGCAG 391 | | || || || || || || |||||| Sbjct 17669 GCCAGGCGTGCCGAAAGTGGGGTTCGGCAG 17640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241540937088