Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= AAMG01002051.1 Length=353 Score E Sequences producing significant alignments: (Bits) Value seq4721 145 2e-32 >seq4721 Length=367317 Score = 145 bits (160), Expect = 2e-32 Identities = 249/358 (70%), Gaps = 15/358 (4%) Strand=Plus/Minus Query 1 CGACCGCCTGCGCCATGTGGCGGAGCGCGCCGAGCTGGGTGAAGGCCGCGAAGCGATCAT 60 ||||||||||||| ||||| || | ||||| |||| || ||||| || | | Sbjct 320147 CGACCGCCTGCGCTTCGTGGCCGAAAGGGCCGAAGTGGGCGAGCAGCGCGAGGCCGTGCT 320088 Query 61 CGCCGTGACCATTCCCGAGAAGCCCGGCAGCTTCAAGGCGTTCTGCGAGGCCGTGGGCAA 120 ||||| ||||| ||||||||||||||| ||||||| ||||||| | | ||||| Sbjct 320087 GGCCGTCACCATCCCCGAGAAGCCCGGCTCCTTCAAGAAGTTCTGCAACCTGCTCGGCAA 320028 Query 121 GCGCCAGATCACCGAATTCAACTACCGTTTCCACTCCGGCAGCGAGGCGCACATCTTTGT 180 ||| | |||||||| ||||||||||| | | | || || | || |||||||| || Sbjct 320027 CCGCAACATCACCGAGTTCAACTACCGCTACGCCGACGCCAACCGCGCCCACATCTTCGT 319968 Query 181 C------GGCGTGCAGACCCACCCCGACACCGACCCCCGCAGCGCGCTGATCGCCAGCCT 234 | |||||||| | || | |||| || | || || || || | |||| Sbjct 319967 CGGCGTGGGCGTGCACAACCGCGCCGAGGGCGTGCGCCTCACCGAACT--CCTGCAGCGC 319910 Query 235 GACCGAGCAGGGTTTCCCGGTGCTGGACCTGACCGAGAATGAGCTGGCCAAGCTGCACAT 294 | ||||| | ||| | |||||||||||||| | ||| |||||||| ||||| Sbjct 319909 CA-CGAGC-----TGCCCTG-CCTGGACCTGACCGACGACGAGATGGCCAAGAGCCACAT 319857 Query 295 CCGCCATATGGTCGGCGGCCATGCGGCGCACGTCAGCAATGAAGTGGTGTTCCGCTTC 352 |||| | |||||||||||||| || | || | | || |||||| ||| ||||||| Sbjct 319856 CCGCTACATGGTCGGCGGCCACGCCCCCCAGGCCGAGAACGAAGTGCTGTACCGCTTC 319799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027151136096