Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq3228 114 2e-23 >seq3228 Length=5903 Score = 114 bits (126), Expect = 2e-23 Identities = 155/215 (72%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 80 ATCCAACCTGAGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCT 139 ||||| || ||||| || ||||| || || | | ||||| || || || ||||| ||| Sbjct 4940 ATCCACCCGCAGCACGGCGAGGAACGCCTCCT-GCGGAATCTCTACATTACCCACCTGCT 4998 Query 140 TCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCAC 199 |||| || || || || | || |||||||| || ||||| ||| || | | ||| | Sbjct 4999 TCATCCGCTTCTTGCCCTCTTTCTGCTTCTCGAGGAGCTTCTTCTTCCGCGTGATGTCGC 5058 Query 200 CGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGA 259 |||||||||| ||||| || |||||||| | || ||||||| || ||| || | || Sbjct 5059 CGCCGTAGCACTTGGCGAGCACGTTCTTGCGCAGGGCCTTGATGGTCTCCCGGGCCACGA 5118 Query 260 TCTGCCCGCCAATGGCGGCCTGGATCGCGACGTCG 294 | | || || ||||||||||| || |||||| Sbjct 5119 TGTTGGAACCGATCGCGGCCTGGATGGCCACGTCG 5153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838360117312