Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq4651 190 5e-44 >seq4651 Length=474197 Score = 190 bits (210), Expect = 5e-44 Identities = 420/627 (67%), Gaps = 2/627 (0%) Strand=Plus/Minus Query 37709 GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAA 37768 ||||| || ||| |||||| || ||||| |||||| | ||| | |||||| | | Sbjct 350275 GACCGCACCGGCACCGGCACCCTCTCGGTCTTCGGCTGGCAGATGCGCTTCGATCTCGCC 350216 Query 37769 GATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTG 37828 || || |||||||| | || || || || | || | |||||| ||||| | || ||| Sbjct 350215 GACGGTTTTCCGCTGCTCACCACCAAGAAGCTCCACACCCGCTCGATCATCCACGAGCTG 350156 Query 37829 CTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATT 37888 || ||||| | ||||| || ||| |||| ||| | |||| || || |||| Sbjct 350155 CTGTGGTTCCTGCGCGGCGACACCAACATCCGGTATCTCAAGGACAACAAGGTTTCGATC 350096 Query 37889 TGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGC 37948 ||||| |||||||| ||||| |||||||| || |||||| | |||||| ||| |||||| Sbjct 350095 TGGGACGAGTGGGCCGACGAGAACGGCGAGCTGGGCCCGGTGTACGGCAAGCAGTGGCGC 350036 Query 37949 TCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAGATC 38008 ||| | | |||||| | |||||||||||||| | | |||| | | || Sbjct 350035 CGCTGGGAAACGCCCGACGGGCGCAGCATCGACCAGATCGGCCAGCTCATCGAGGCGCTC 349976 Query 38009 AAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGAC 38068 || || ||| | || ||||| | | ||| || ||||| || || ||||| Sbjct 349975 AAGAAGAACCCGGACTCCCGCCGCCACATCGTGTCGGCCTGGAACCCGGCCGACGTGGAC 349916 Query 38069 GAGATGAAGCTGCCGCCGTGTCATTACGC-CTTTCAGTTCTATGTCGCCAACGGCCGGTT 38127 ||| |||||||| || || ||| || |||||||| || ||| ||||| | | Sbjct 349915 CGCATGGCCCTGCCGCCCTGCCA-CGCGCTGTTCCAGTTCTACGTGGCCGACGGCAAGCT 349857 Query 38128 GTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACATCGC 38187 ||| ||| | | |||||| || || | || | || | || || |||||||| Sbjct 349856 GTCGTGCCAGCTCTATCAGCGCAGCGCCGACATCTTCCTGGGCGTTCCCTTCAACATCGC 349797 Query 38188 GAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGTCGGTGAACT 38247 ||||||||||| || ||| ||||| ||||| |||| || | || || | Sbjct 349796 CAGCTACGCGCTCTTCACGATGATGGTGGCCCAGGTGTGCGGCTACGCGCCGGGCGATTT 349737 Query 38248 CATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACTGCA 38307 | | | |||||||||||| ||| | ||| || || || || || || ||||| Sbjct 349736 CGTGTGGACCGGCGGCGACTGCCACCTCTACCTGAACCACCTCGAGCAGGCCCGCCTGCA 349677 Query 38308 GCTGACGCGCGAGCCGCGCCCGCTGCC 38334 ||| | |||||||| ||||| ||||| Sbjct 349676 GCTCTCCCGCGAGCCCCGCCCCCTGCC 349650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130632620228050