Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq818 116 1e-21 >seq818 Length=58372 Score = 116 bits (128), Expect = 1e-21 Identities = 180/257 (70%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 33670 GTGCGCAACTGACCTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTCACCAGCAATT 33729 || |||||||| ||||| | ||||| ||||| || ||| |||||||| || || ||| Sbjct 56233 GTACGCAACTGCCCTTCGATGTAAACCTGTGATCCCTTCTGGAGATACTCTCCGGCGATT 56174 Query 33730 TCAGCGAGCTTGCCAAAGATAACTACGCGGTGCCATTCAGTTTGCTCCTTTTTCTCACCA 33789 || ||||| || || || | || || || |||||||| || | || | | |||||| Sbjct 56173 TCCGCGAGTTTCCCGAACAAGACCACACGATGCCATTCCGTGTTTTCTCTCTGCTCACCG 56114 Query 33790 GTAGCCTTATCATTCCATGATTCCGATGTAGCAACAGATACGTTGGCAACAGCGCCGCCA 33849 || || ||| ||||| ||| || || || | | | ||||| || ||||||||| Sbjct 56113 GTCTGTTTGTCACGCCATGTTTCAGAGGTTGCCAGCGTCAAATTGGCTACCGCGCCGCCA 56054 Query 33850 TTTGGCATGTATCGCACTTCTGGGTCCTGGCCTAATGTGCCGAGGATGATTACTTTATTT 33909 || ||||| || ||||| || || |||| || || |||| | | | ||| | ||| Sbjct 56053 TTCGGCATATAACGCACCTCGGGAGCCTGCCCCAAGTTGCCAACCAATGTCACTCTGTTT 55994 Query 33910 ACGCCGCGAGTTGCCAT 33926 ||||| || |||||| Sbjct 55993 ACGCCACGCTCTGCCAT 55977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144964610577136