Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_033703.1 Length=9314 Score E Sequences producing significant alignments: (Bits) Value seq58 132 3e-27 >seq58 Length=3045158 Score = 132 bits (146), Expect = 3e-27 Identities = 242/355 (68%), Gaps = 16/355 (5%) Strand=Plus/Plus Query 4472 GCAAATCACTTCGATTATTCAAAATGGAACAACACACAAAGAGGGAAAGCAAATAATCCA 4531 || |||||||| ||||||||||||||||||||| || | || | || || ||||| Sbjct 2382685 GCTAATCACTTGGATTATTCAAAATGGAACAACCACCAGCGCGGCGAGGCTAACGATCCA 2382744 Query 4532 GTGTTCCGAGTTATGGGGAAATTCTTGGGGCTCCCAAATATCATCTCAAGAACTCATGAG 4591 || ||||| || |||||| ||||| |||| ||||||||| | | |||| |||||| Sbjct 2382745 GTATTCCGGGTCATGGGGCAATTCCTGGGCCTCCCAAATCTTTTGGTGCGAACACATGAG 2382804 Query 4592 TTCTTCGAGAGGAGCTGGATTTACTACAATGACAGATCGGATTTGATGGAACTAGTTGAA 4651 || || | | | | ||| |||||||| ||| | ||||||||||| | ||||||| Sbjct 2382805 TTTTTTGGCAAGTCCCTGATATACTACAAGGACCGGCCGGATTTGATG---CGAGTTGAA 2382861 Query 4652 --------GGTGAAATCCGCAACCGAACCACCCAAAGAGTTTGCTGGAATGGGCAACTGG 4703 |||| || | || || | | || |||||||| || || | | Sbjct 2382862 AACGGAACGGTGGTGACCTCGACAGA-----GGAGATGGTATGCTGGAAAGGCCAGCCAG 2382916 Query 4704 GGGGACTTGAAGGGCTAAGACAAAAAGGATGGAGTGTGGTAAGCCTACTTGTAATTGAAC 4763 | || || |||||||| |||| || || ||||||||||| | | || | || |||| Sbjct 2382917 GCGGCCTAGAAGGGCTCCGACAGAAGGGGTGGAGTGTGGTGAACTATCTCGGGATAGAAC 2382976 Query 4764 GTGAAGGCAAAATACGAAACACAAAAATCAAAATACTCGCACAGGGGGACAATCA 4818 | ||| ||||| |||||||| | ||| || || |||||||| || || Sbjct 2382977 GACAAGCTAAAATCCGAAACACGCAGGTCAGGTGTCTTGCTCAGGGGGATAACCA 2383031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 29688011123944