Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_028484.1 Length=11343 Score E Sequences producing significant alignments: (Bits) Value seq1480 266 2e-67 >seq1480 Length=8353993 Score = 266 bits (294), Expect = 2e-67 Identities = 490/715 (69%), Gaps = 10/715 (1%) Strand=Plus/Minus Query 6791 TAACGTTTGCGAATCACATCGATTACGAAAAGTGGAACAATTTCCAAAGATATGAATCAA 6850 |||| | || |||||||||||||| ||||| |||||||| || |||||| || | | Sbjct 8252955 TAACTATCGCTAATCACATCGATTATGAAAAATGGAACAACTTTCAAAGAAGAGAGGCCA 8252896 Query 6851 CAGCTCCTGTTTTCCGGGTGATTGGACAATTTTTTGGTCTACCGAACTTATTTGTGCGAA 6910 | | || |||||| |||||||| ||||||||||| ||||| || |||| | || | Sbjct 8252895 CTTCCCCCGTTTTCACAGTGATTGGGCAATTTTTTGGACTACCTAATCTATTCGCCCGCA 8252836 Query 6911 CGCATGAATTCTTTGAAAAAGCACTGGTGTACTATCGAGACAGACCTGACCTGATGAAGG 6970 |||||||||||||||||||| || | | || ||||||||| | || || || || |||| Sbjct 8252835 CGCATGAATTCTTTGAAAAATCATTAATATATTATCGAGACCGTCCAGATCTAATAAAGG 8252776 Query 6971 TCGTGGACGATCAAGTGTACAATAGGGATGATACGAAGAGGGTTA---GCTGGAATGGTC 7027 ||| | ||| ||| | | | || || | ||| | | | |||||||| | Sbjct 8252775 TCG---AAGATGGGGTGGTCGCGAATGTGGACCCGGAAAGGATGATGTGTTGGAATGGAC 8252719 Query 7028 AAAAAGGAGGCTTGGAAGGTCTTCGCCAAAAAGGATGGAGTGTATTGAATCTTTTAGTGA 7087 | ||||| | ||||| | | |||||||| |||||||| | ||| | || || | Sbjct 8252718 AGGCCGGAGGACTCGAAGGGTTGAGACAAAAAGGGTGGAGTGTTCTCAATTTATTGGTAA 8252659 Query 7088 TTGAACGAGAATCTCGTATCCGAAACACCGAAATAAAAACGCTGGCTCAAGGAGACAATC 7147 | || | || || || || || ||||| | | ||| | ||||| || ||||||| Sbjct 8252658 TCGAGAGGGAGTCACGCATTCGTAACACTAAGGTGCTCACGTTAGCTCAGGGTGACAATC 8252599 Query 7148 AAGTGATTTGCACTCAATATGCCATAAATCCGTCCAAGACCGAAGCAGAGTTAAGTGGGA 7207 | || ||||||||| ||| | || | | |||||| |||||||| | || || Sbjct 8252598 AGGTCATTTGCACTGTGTATCAGACAAGGGCATTCAAGACAGAAGCAGA--TCAGCACGA 8252541 Query 7208 ACATCTTAGCGGCA--ATGCAGAATAATGATGTGATCATCGCAGCTATTCGAACTGCAAC 7265 ||| || || | || |||| ||||| || ||| | | | || || || || Sbjct 8252540 GCATATTCAAGGGATTATCAAGAACAATGAGGTTATCGTAGACTCGATCAGACGGGCTAC 8252481 Query 7266 GGCCCGGATTGGATTACGCATCAACGAGGATGAGACTTTGCAAGCTGCAGATCTCCTGAT 7325 || || | |||||| || || ||||| ||||| ||||| || ||||| | || | Sbjct 8252480 CCAGCGTATAGAATTACGTATTAATGAGGACGAGACCTTGCAGGCAGCAGACATGTTGCT 8252421 Query 7326 ATACGGGAAAACCATAGTGTTCAGAGGAAATTTGACTTGTCTCGAGGAGAAACGATATTC 7385 ||| ||||| | ||||| | | ||||| | || || || | ||||||||||| || || Sbjct 8252420 ATATGGGAAGTCAATAGTATACCGAGGAGACTTCACCTGCTTGGAGGAGAAACGGTACTC 8252361 Query 7386 CCGCGTGACATGCACCACCAACGACCAATTGCCTTCGTTGGGTAATGTACTGTCCACCGT 7445 ||| | || |||||||| || ||||| || || | || || ||| | || | ||||| Sbjct 8252360 GCGCATTACTTGCACCACTAATGACCAGTTACCATGCTTCGGCAATATTCTTGCTACCGT 8252301 Query 7446 TTCAACCAATTGCTTAACGATTGCACACTACTCCAAAAGCCCCCTGAATGCCATG 7500 || ||||| || || || | || || ||||| || || || || ||||| ||| Sbjct 8252300 ATCTACCAACTGTTTGACTGTAGCTCATTACTCTAAGAGTCCTCTCAATGCGATG 8252246 Score = 159 bits (176), Expect = 3e-35 Identities = 278/402 (69%), Gaps = 2/402 (0%) Strand=Plus/Minus Query 6370 GTAGTAGATCCTGCGATAATTTACTCAGATAAAACTCACTCTATCACAAAGACCGAATTG 6429 || || |||||||| | || ||||||||||| ||||||||||| ||||| ||| | Sbjct 8254234 GTTGTGGATCCTGCATTGATCTACTCAGATAAGACTCACTCTATACAAAAGAATGAACTC 8254175 Query 6430 ATCAAACATTTGAAGCAAAATCCTCATTCGAGAATTCCTACTCGGAAAGTGTTGCACACT 6489 || | |||||| | |||| || | || ||||| || | ||| | | || Sbjct 8254174 ATTCATCATTTGGTCCGGCATCCGAATACACCGATCCCTACCCGTGAGGTGCTAGATACA 8254115 Query 6490 CTATTAACCACCAAAAGCACTGATTGGCCTGCATTCTTGAAGGAGATCGATGAACAAGGA 6549 || | |||| |||| || | ||||| | |||| ||| | ||| | | || | | Sbjct 8254114 CTTCTCCACACCGAAAGTACAAACTGGCCAGAATTCCTGACGCAGA-CAAACAATATCGT 8254056 Query 6550 TTGCA-GGAAGATGATTTGGTAATTGGATTAAAGGCAAAAGAGAGAGAGATTAAGTGGAA 6608 | || ||| ||||| | | || ||| | ||||| |||||| | || ||||| ||||| Sbjct 8254055 TCTCACGGACAATGATCTCATTATCGGACTGAAGGCTAAAGAGCGGGAAATTAAATGGAA 8253996 Query 6609 AGGACGATTCTTTGCACTCATGAGTTGGCGCCTTCGCGAGTACTTTGTATTTACTGAATA 6668 |||| |||||||||| |||||||| ||| | | |||||||| ||||| | || || Sbjct 8253995 AGGAAGATTCTTTGCTCTCATGAGCTGGTCGTTAAGGGAGTACTTCGTATTCTCAGAGTA 8253936 Query 6669 TTTAATCAAGAAGAATGTGATCCCACTATTCAAAGGATTGACCATGGCGGATGATCAAAC 6728 ||||| ||||| || | || || |||||||||| | |||||||| || ||||| || Sbjct 8253935 CTTAATAAAGAAAAAAATAATTCCTTTATTCAAAGGTCTTACCATGGCAGACGATCAGAC 8253876 Query 6729 GACTTTGATCAAGAAGATGATTCAGAACACAAGTGGACAAGG 6770 ||| |||| | ||||| | |||||||||| || || Sbjct 8253875 GACACTGATGGGGTAGATGTTATCCCACACAAGTGGCCAGGG 8253834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36181408828380