Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_032733.1 Length=7081 Score E Sequences producing significant alignments: (Bits) Value seq45 136 2e-28 seq314 129 3e-26 seq932 114 6e-22 >seq45 Length=3737895 Score = 136 bits (150), Expect = 2e-28 Identities = 705/1105 (64%), Gaps = 50/1105 (5%) Strand=Plus/Minus Query 4812 GTTGAGACCCGGCAGGTGTGGGTTTCGTCGGGAAGTACTGGTGG---GAAACGCATGAAG 4868 || ||| | |||||| |||||||| || || ||||| || || |||| || | Sbjct 1201487 GTCGAGTCGCGGCAGCGCTGGGTTTCCTCAGGTAGTACCGGAGGCGCGAAAT---TGCAC 1201431 Query 4869 ATGAACGATGGCACCGTCTCCCGTGTTAACAAACACGCATATTTCGAGAGCCTTACGACA 4928 || || || ||||| || | |||||||| || ||||| || | | |||| Sbjct 1201430 CTGCCTGACGGATCCGTCCTTCGCATGAACAAACAAGCGTATTTTGATTCCATCACGAGT 1201371 Query 4929 GAGGAGATGGTTGCGTGGATGGCTGAGCCTCCACGTATTCAGGCCACGGCTAGCGAGAAG 4988 ||||||||| | |||| ||| | || || ||||| ||||| ||||| || || || Sbjct 1201370 GAGGAGATGATCAAGTGGCTGGATCAGGAACCGCGTATGCAGGCGACGGCGAGTGAAAAA 1201311 Query 4989 TATGAAATGGGGAAAGCGCGCGCAATATATGGCACTGAGCCGGTGGATTATGCAATTTCA 5048 | |||||||| || || || ||||| || || |||| ||||| || || | Sbjct 1201310 TTCGAAATGGGAAAGGCCCGTGCAATTTACGGAACTGGTGTTAATGATTACGCCATCTGC 1201251 Query 5049 TCGTACGTGTTAGATGATATAGAGGACCACTTATACAATGTGGATGGCATTGAGAGCGGG 5108 | || | | |||| | || ||||| ||||| || |||| ||| || || ||||||||| Sbjct 1201250 TGTTATGCGCTAGAAGGGATCGAGGAGCACTTGTATAATGCGGACGGGATCGAGAGCGGG 1201191 Query 5109 C-TGACGGATATGGATTTCTTGGTGGCCATGATCAGACG-GCTAAGGAAGGTGGAAAGTT 5166 | || |||| | ||| ||| | | | || ||||| | | || | | || | Sbjct 1201190 CTTGTCGGA-GTTGATAGCTTAGCTACGCTAATAAGACGTGTTCAGACTGCAAGTAA-TC 1201133 Query 5167 CGGAGGTCGAGTGCACCATGATCGACTACTCAGACTTCAATTACCAACACACCCTCGAAG 5226 | || |||||||| ||| | || ||| | || || |||||||| ||||| || || Sbjct 1201132 CAGAAACTGAGTGCACTATGGTGGATTACACTGATTTTAATTACCAGCACACGCTATTAG 1201073 Query 5227 CTCAGAGTCTGGTTTTCAAATGTTTATCTGCACGTCTGCGC--------ACGATGGGCCA 5278 | ||||| |||||||| | | ||| | | | || | | || | ||| Sbjct 1201072 CCCAGAGCTTGGTTTTCCA----GTCGCTGGAAGAC-GCTCTAGAAGTAAAGAAGTACCA 1201018 Query 5279 CCACGACGATAAGGT---AGCTGCCTGCGATTGGGTGGCTGCTGCCATGTTGAACCAATG 5335 | || || ||||| ||| ||| | ||||| || | ||| || | || ||| Sbjct 1201017 TC-CG--GACAAGGTCCGAGCAGCCAG---ATGGGTCGCCGATGCTCTGCTCAATCAACA 1200964 Query 5336 GTGCAAGTTTCCTGGAGTCAAGCGCGTTGCCCAGCGAGTTGTTCAAGGTATGTTTTCTGG 5395 |||||||| || | | ||| | || || |||||||| || || |||||||| || Sbjct 1200963 CTGCAAGTTCCCAGAGGATAAGGGTGTCTCCGTTCGAGTTGTACAGGGCATGTTTTCCGG 1200904 Query 5396 TGTGCGAGGCACCAACTTTATAAACACTACACTGAACGTAGGCTACTATAGGGT-GGCAA 5454 || ||||||||||| | || || || ||| |||| | | | | ||| Sbjct 1200903 ATGCCGTGGCACCAACTTCCTGAATACCGTGCTTAACCGTTGCTA-TTTCGCCTACGCAC 1200845 Query 5455 GGCGCTGGGTCAGCGAGAATTTGAACCTCCGGCCGACGGATGAGTTTAACTTGCATCAGG 5514 | ||||| || |||| ||| | | | ||| | | ||| | || || | Sbjct 1200844 GTGAATGGGTGTTGTTGAGTTTGGGCCTGCATGCTAAGGACTTGGTGAACATACACCAAG 1200785 Query 5515 GAGACGATGTGTGGATATCGAATAAGAGTCGATTGTGGGCCATGGCTATGTATGAAAGTA 5574 | || || ||||||||||| |||||||| || |||||||| || | | || || || Sbjct 1200784 GGGATGACGTGTGGATATCTAATAAGAGCCGTTTGTGGGCTATATCCTTATA-CAACGTC 1200726 Query 5575 TG--CAGTCAACCGGCCTGATCTTCCAACCATCCAAGCAAATGTTTGACACAAGTAGG-- 5630 || ||| | | ||| || |||||||| || ||||| |||||||| || || Sbjct 1200725 TGTTCAG-CTATCGGGCTCGAATTCCAACCCTCGAAGCAGCTGTTTGAC----GTCGGGC 1200671 Query 5631 --GGAGAGTTCCTACGCGTCGTGTACACGTCCAAAGGGTGCCAAGGCTATCTGGCGAGAG 5688 |||||||| |||||||| || ||||| | |||| || || |||| |||| Sbjct 1200670 TTGGAGAGTTTCTACGCGTGGTATACACTGGTGGATCTTGCCGCGGTTACGTGGCCAGAG 1200611 Query 5689 CAGTCGGGACGTTGATAGTGAAACCGATACAGAGTACCGAGGTGGTGGCTCCGGCTGAGC 5748 | |||| || || |||| || || || || | || || || || ||||| | Sbjct 1200610 CTGTCGCTACCACAGTAATGAAGCCTATCCAAGGTGCAGACGTCGTAAGCCCAGCTGAAC 1200551 Query 5749 GTGCCCACGCATTGAGTAGTCAGATTGCCATATTACATCGGCGTGGTTATACGGAGGAAG 5808 ||||| || |||| ||| ||| | | || |||||| |||| ||||| || | Sbjct 1200550 GTGCCTCGGCCTTGAATAGCCAGTTAATGACCTTGGTTCGGCGCGGTTTCACGGAAGAGG 1200491 Query 5809 GTAGCAAAGTGT--TGTGGGAAGCCGTAGTTCCCTACGCTGCCCGCGCGAAGCTGGTGAG 5866 | | || | ||||| || | | |||||||| ||| | || ||| |||| Sbjct 1200490 G--GGCTCGTATCCTGTGGAGTGCTATCATCCCCTACGCCGCCAGGGCAAAGTTGGTCGA 1200433 Query 5867 TGGTGCATTGACAATCCCCGTCGGT 5891 || || ||||| || || |||||| Sbjct 1200432 AGGGGCCTTGACCATACCGGTCGGT 1200408 >seq314 Length=1960505 Score = 129 bits (142), Expect = 3e-26 Identities = 250/361 (69%), Gaps = 16/361 (4%) Strand=Plus/Plus Query 4896 AACAAACACGCATATTTCGAGAGC----CTTACGACAGAGGAGATGGTTGCGTGGATGGC 4951 |||||||| || | |||||| ||| || ||||| |||||| |||| ||| Sbjct 677159 AACAAACAAGCCTTTTTCGACAGCGTGCCTCGCGACAC----GATGGTCAGGTGGCTGGA 677214 Query 4952 TGAGCCTCCACGTATTCAGGCCACGGCTAGCGAGAAGTATGAAATGGGGAAAGCGCGCGC 5011 ||||||||| || ||||| || || ||||| ||||| ||||| || |||||||| Sbjct 677215 TGAGCCTCCGATGATAATAGCCACAGCGAGTGAGAAATATGAGATGGGCAAGGCGCGCGC 677274 Query 5012 AATATATGGCACTGAGCCGGTG--GATTATGCAATTTCATCGTACGTGTTAGATGATATA 5069 || ||||| || || || || |||||||| | |||| | | || |||| Sbjct 677275 CATCTATGGAAC--AGGCGTCAAAGACTATGCAATCTGTGCGTATGCCCTGGACCGTATA 677332 Query 5070 GAGGACCACTTATACAATGTGGATGGCATTGAGAGCGGGCTG-ACGGATATGGATTTCTT 5128 ||||| | |||||||| | || || | |||||||| | | |||| | ||| Sbjct 677333 GAGGAATATCTATACAATATAGACGGAGTGGAGAGCGGATTCCAAGGATTCGACCATCT- 677391 Query 5129 GGTGGCCATGATCAGACGGCTAAG-GAAGGTGGAAAGTTCGGAGGTCGAGTGCACCATGA 5187 || | |||||||| || || | | || | ||| || ||| |||||||||||| Sbjct 677392 GGCCACGATGATCAGGCGTGTACGTGCAGCCAGCAAGC-CGAGGGTAGAGTGCACCATGG 677450 Query 5188 TCGACTACTCAGACTTCAATTACCAACACACCCTCGAAGCTCAGAGTCTGGTTTTCAAAT 5247 | ||||| |||||||||| |||||||||||||| |||| |||||||| || ||||| | Sbjct 677451 TTGACTATGCAGACTTCAACTACCAACACACCCTGCAAGCACAGAGTCTCGTGTTCAAGT 677510 Query 5248 G 5248 | Sbjct 677511 G 677511 >seq932 Length=2545319 Score = 114 bits (126), Expect = 6e-22 Identities = 246/357 (69%), Gaps = 8/357 (2%) Strand=Plus/Minus Query 4896 AACAAACACGCATATTTCGAGAGCCTTACGACAGAGGA-GATGGTTGCGTGGATGGCTGA 4954 |||||||| || | |||||| ||| | | | || | |||||| |||| ||| ||| Sbjct 1317131 AACAAACAAGCCTTTTTCGACAGCGTGCCT-CGGAACACGATGGTCAGGTGGCTGGATGA 1317073 Query 4955 GCCTCCACGTATTCAGGCCACGGCTAGCGAGAAGTATGAAATGGGGAAAGCGCGCGCAAT 5014 |||||| || ||||| || || ||||| ||||| ||||| || |||||||| || Sbjct 1317072 GCCTCCGATGATAATAGCCACAGCGAGTGAGAAATATGAGATGGGCAAGGCGCGCGCCAT 1317013 Query 5015 ATATGGCACT-GAGCCGGTGGATTATGCAATTTCATCGTACGTGTTAGATGATATAGAGG 5073 ||||| || ||| | | | |||||||| | |||| | | || |||||||| Sbjct 1317012 CTATGGAACAAGAGACAAAG-ACTATGCAATCTGTGCGTATGCCCTGGACCGTATAGAGG 1316954 Query 5074 ACCACTTATACAATGTGGATGGCATTGAGAGCGGGCTG-ACGGATATGGATTTCTTGGTG 5132 | | |||||||| | || || | |||||||| | | |||| | ||| || Sbjct 1316953 AATATCTATACAATATAGACGGGGTGGAGAGCGGATTACAAGGATTCGACCATCT-GGCC 1316895 Query 5133 GCCATGATCAGACGGCTAAG-GAAGGTGGAAAGTTCGGAGGTCGAGTGCACCATGATCGA 5191 | |||||||| || || | | || | || || ||| |||| ||||||| | || Sbjct 1316894 ACGATGATCAGGCGTGTACGTGCAGCCAGCGAGC-CGAGGGTAGAGTTCACCATGGTTGA 1316836 Query 5192 CTACTCAGACTTCAATTACCAACACACCCTCGAAGCTCAGAGTCTGGTTTTCAAATG 5248 ||| |||||||||| |||||||||||||| ||| |||||||| || ||||| || Sbjct 1316835 CTATGCAGACTTCAACTACCAACACACCCTGCTAGCACAGAGTCTCGTGTTCAAGTG 1316779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 22543382435300