Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_033034.1 Length=13000 Score E Sequences producing significant alignments: (Bits) Value seq1594 118 9e-23 seq1480 114 1e-21 >seq1594 Length=5600000 Score = 118 bits (130), Expect = 9e-23 Identities = 240/350 (69%), Gaps = 6/350 (2%) Strand=Plus/Plus Query 8256 AAATGGAATAACCACCAACGACAAGCCTCGACTGGTCCTGTATTTAAGGTGATGGGACAA 8315 |||||||| ||||| |||||| || | | || ||||| || ||||||||||| ||| Sbjct 3582943 AAATGGAACAACCATCAACGAGGAGAAGCCAATGACCCTGTGTTCAAGGTGATGGGCCAA 3583002 Query 8316 TTCTTGGGTTACCCTAATTTAATTTAC-AGAACACACGAATTTTTTGAGAAAAGCCTGAT 8374 || |||||| ||| ||||| ||||| |||| ||||| || ||| ||| |||||| Sbjct 3583003 TTTTTGGGTCTCCCAAATTT-GTTTACTCGAACTCACGAGTTCTTTCGGAAGTCCCTGAT 3583061 Query 8375 TTATTATGGATATTATCCAGAATTATTGAGTGTTGTAAATGGGGAAGTTGCAAATAATTC 8434 || || | || ||||| | |||| |||| | ||| |||| |||| | Sbjct 3583062 CTACTACAAAGATAGACCAGACCTCATGAGGGTTGAATCCGGGAAAGTCATAAATGCAAC 3583121 Query 8435 TGATAAACGAGTGTGCTGGAATGGCCAGGCAGGAGGGCTGGAAGGGTTACGTCAGAAGGG 8494 || | || || ||||| ||||| ||||| ||||| || || | || || || || Sbjct 3583122 AGAACATATCGTTTGTTGGAAGGGCCAAGCAGGCGGGCTAGAGGGCCTGCGCCAAAAAGG 3583181 Query 8495 ATGGAGCATTTTAAACTTATTGGTAATTAGGAGAG-AAGGAGCTCATCGA-AATACACAA 8552 ||||||| || | |||| ||| || ||| | ||| ||| | ||||| || Sbjct 3583182 ATGGAGCGTTGTGAACTACCTGGGCAT--CGAGCGTCAGGCCAAGATCCAGAATACCCAT 3583239 Query 8553 GTGAGATGTCTAGCTCAAGGAGACAATCAGGTTATCTGCACCTTATACAA 8602 | | ||||| || ||||||||||| ||| | || |||||||| ||||| Sbjct 3583240 ATCAAGTGTCTGGCCCAAGGAGACAACCAGATAATATGCACCTTCTACAA 3583289 >seq1480 Length=8353993 Score = 114 bits (126), Expect = 1e-21 Identities = 251/368 (68%), Gaps = 15/368 (4%) Strand=Plus/Minus Query 8235 GCCAATCACATCGATTATGAGAAATGGAATAACCACCAACGACAAGCCTCGACTGGTCCT 8294 || ||||||||||||||||| |||||||| ||| ||| || || | ||| || Sbjct 8252947 GCTAATCACATCGATTATGAAAAATGGAACAACTTTCAAAGAAGAGAGGCCACTTCCCCC 8252888 Query 8295 GTATTTAAGGTGATGGGACAATTCTTGGGTTACCCTAATTTAATTTACAGAACACACGAA 8354 || || | ||||| || ||||| || || |||||| || | | | || || ||| Sbjct 8252887 GTTTTCACAGTGATTGGGCAATTTTTTGGACTACCTAATCTATTCGCCCGCACGCATGAA 8252828 Query 8355 TTTTTTGAGAAAAGCCTGATTTATTATGGATATTATCCAGAATTATTGAGTGTTGTAAAT 8414 || ||||| ||| | || |||||| || | |||||| || | | || | | || Sbjct 8252827 TTCTTTGAAAAATCATTAATATATTATCGAGACCGTCCAGATCTAATAAAGGTCGAAGAT 8252768 Query 8415 GGGGAAGTTGCAAATA---ATTCTGATAA-ACGAGTGTGCTGGAATGGCCAGGCAGGAGG 8470 |||| || || ||| | | || | | || |||| |||||||| ||||| ||||| Sbjct 8252767 GGGGTGGTCGCGAATGTGGACCCGGAAAGGATGA-TGTGTTGGAATGGACAGGCCGGAGG 8252709 Query 8471 GCTGGAAGGGTTACGTCAGAAGGGATGGAGCATTTTAAACTTATTGGTAATTAGGAGAGA 8530 || |||||||| | || || || ||||| || | || ||||||||||| |||| Sbjct 8252708 ACTCGAAGGGTTGAGACAAAAAGGGTGGAGTGTTCTCAATTTATTGGTAAT----CGAGA 8252653 Query 8531 AGGAG---CTCA-TCGAAATACACAAGTG-AGATGTCTAGCTCAAGGAGACAATCAGGTT 8585 |||| | || ||| || || | ||| | || ||||||| || ||||||||||| Sbjct 8252652 GGGAGTCACGCATTCGTAACACTAAGGTGCTCACGT-TAGCTCAGGGTGACAATCAGGTC 8252594 Query 8586 ATCTGCAC 8593 || ||||| Sbjct 8252593 ATTTGCAC 8252586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41483663575760