Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_033316.1 Length=1652 Score E Sequences producing significant alignments: (Bits) Value seq65 86.0 6e-14 seq570 80.6 3e-12 >seq65 Length=4361017 Score = 86.0 bits (94), Expect = 6e-14 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 237 ACAGGACCGAAGGGACCAGAAGTTCCACCTCCAAGGCATAAAGACGTGCCACAA-ACGCC 295 || |||||||| ||||| || | || || |||| ||| ||| | |||| || || Sbjct 2445036 ACGGGACCGAAAGGACCTGAGTTACCGCCGCCAACCCATCTAGAGGCAA-ACAAGACACC 2445094 Query 296 AACACCACAACGGAATGACTCAATCATTGCAGAAGCTATATTTGGAGTAAATGTTTCAGT 355 ||||||||||| ||||| |||||||||||||| || || || ||||| ||||||| || Sbjct 2445095 GACACCACAACGCAATGAGTCAATCATTGCAGAGGCAATCTTCGGAGTGGATGTTTCTGT 2445154 Query 356 CCAACCGATTGAACCTTTGCA 376 | ||||| | || ||||| Sbjct 2445155 CGTGCCGATAGCGCCATTGCA 2445175 >seq570 Length=1853759 Score = 80.6 bits (88), Expect = 3e-12 Identities = 104/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 237 ACAGGACCGAAGGGACCAGAAGTTCCACCTCCAAGGCATAAAGACGTGCCACAA-ACGCC 295 || || ||||| ||||| || | || || |||| ||| ||| | |||| || || Sbjct 199316 ACGGGGCCGAAAGGACCTGAGTTACCGCCGCCAACCCATCTAGAGGCAA-ACAAGACACC 199374 Query 296 AACACCACAACGGAATGACTCAATCATTGCAGAAGCTATATTTGGAGTAAATGTTTCAGT 355 ||||||||||| ||||| |||||||||||||| || || || ||||| ||||||| || Sbjct 199375 GACACCACAACGCAATGAGTCAATCATTGCAGAGGCAATCTTCGGAGTGGATGTTTCTGT 199434 Query 356 CCAACCGATTGAACCTTTGCA 376 | ||||| | || ||||| Sbjct 199435 CGTGCCGATAGCGCCATTGCA 199455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5177466045780