Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_033701.1 Length=11743 Score E Sequences producing significant alignments: (Bits) Value seq1594 104 2e-18 >seq1594 Length=5600000 Score = 104 bits (114), Expect = 2e-18 Identities = 236/354 (67%), Gaps = 12/354 (3%) Strand=Plus/Plus Query 6933 TGCAAATCATTTTGACTATTCGAAATGGAACAATACTCAACGAGGGGCTGCCAATGACCC 6992 ||| || || | ||||| || ||||||||||| ||||||||| | ||||||||||| Sbjct 3582921 TGCTAACCACCTAGACTACTCCAAATGGAACAACCATCAACGAGGAGAAGCCAATGACCC 3582980 Query 6993 AGTCTTCCTTGTCATGGGTAAATTTTTAGGACTACCGAAACTCTTTGTAAGAACCCACGA 7052 || ||| || ||||| ||||||| || || || || | ||| |||| ||||| Sbjct 3582981 TGTGTTCAAGGTGATGGGCCAATTTTTGGGTCTCCCAAATTTGTTTACTCGAACTCACGA 3583040 Query 7053 GTTTTTTGAGAAGAGCTGGATTTACTATAACGATCGAGGAGATTTAATTTCTGTGCAGGA 7112 ||| ||| |||| | ||| ||||| || ||| || ||| | | || || Sbjct 3583041 GTTCTTTCGGAAGTCCCTGATCTACTACAAAGATAGACCAGACCTCA------TGAGGGT 3583094 Query 7113 TGATTGCTTGACCAACAAAACTG----AGAAAAGA--GTTTGTTGGATTGGTCAAAAGGG 7166 ||| | | || || || || |||| | | |||||||||| || ||| || Sbjct 3583095 TGAATCCGGGAAAGTCATAAATGCAACAGAACATATCGTTTGTTGGAAGGGCCAAGCAGG 3583154 Query 7167 AGGCCTAGAGGGATTAAGACAAAAAGGATGGAGCATTGTAAGTTTGCTTATGATTGAGAG 7226 || |||||||| | | ||||||||||||||| |||| | | || || ||| | Sbjct 3583155 CGGGCTAGAGGGCCTGCGCCAAAAAGGATGGAGCGTTGTGAACTACCTGGGCATCGAGCG 3583214 Query 7227 AGAAAGCAAGATCCGTAATACCCTAATCAAAGTCCTAGCACAAGGAGATAATCA 7280 | |||||||| ||||||| ||||| || || |||||||| || || Sbjct 3583215 TCAGGCCAAGATCCAGAATACCCATATCAAGTGTCTGGCCCAAGGAGACAACCA 3583268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37461373764380