Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_033703.1 Length=9314 Score E Sequences producing significant alignments: (Bits) Value seq1594 93.3 3e-15 >seq1594 Length=5600000 Score = 93.3 bits (102), Expect = 3e-15 Identities = 242/368 (66%), Gaps = 12/368 (3%) Strand=Plus/Plus Query 4471 TGCAAATCACTTCGATTATTCAAAATGGAACAACACACAAAGAGGGAAAGCAAATAATCC 4530 ||| || ||| | || || || |||||||||||| ||| |||| |||| ||| | || Sbjct 3582921 TGCTAACCACCTAGACTACTCCAAATGGAACAACCATCAACGAGGAGAAGCCAATGACCC 3582980 Query 4531 AGTGTTCCGAGTTATGGGGAAATTCTTGGGGCTCCCAAATATCATCTCAAGAACTCATGA 4590 |||||| || ||||| |||| ||||| ||||||||| | | | ||||||| || Sbjct 3582981 TGTGTTCAAGGTGATGGGCCAATTTTTGGGTCTCCCAAATTTGTTTACTCGAACTCACGA 3583040 Query 4591 GTTCTTCGAGAGGAGCTGGATTTACTACAATGACAGATCGGATTTGATG------GAACT 4644 |||||| || | | ||| |||||||| || ||| | || | ||| ||| | Sbjct 3583041 GTTCTTTCGGAAGTCCCTGATCTACTACAAAGATAGACCAGACCTCATGAGGGTTGAA-T 3583099 Query 4645 AGTTGAAGGTGAAATCCGCAACCGAACCACCCAAAGAGTTTGCTGGAATGGGCAACTGGG 4704 ||| || | | ||||| ||| || | ||||| ||||| || ||| || Sbjct 3583100 CCGGGAAAGTCATAAATGCAACAGAA-----CATATCGTTTGTTGGAAGGGCCAAGCAGG 3583154 Query 4705 GGGACTTGAAGGGCTAAGACAAAAAGGATGGAGTGTGGTAAGCCTACTTGTAATTGAACG 4764 || || || || || | |||||||||||||| || || | | || | || || || Sbjct 3583155 CGGGCTAGAGGGCCTGCGCCAAAAAGGATGGAGCGTTGTGAACTACCTGGGCATCGAGCG 3583214 Query 4765 TGAAGGCAAAATACGAAACACAAAAATCAAAATACTCGCACAGGGGGACAATCAAGTTGT 4824 | | | ||| || | || || | ||||| || || || || ||||| || | | Sbjct 3583215 TCAGGCCAAGATCCAGAATACCCATATCAAGTGTCTGGCCCAAGGAGACAACCAGATAAT 3583274 Query 4825 TTGCACCT 4832 ||||||| Sbjct 3583275 ATGCACCT 3583282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 29688786690520