Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09]
2,435 sequences; 2,247,306,217 total letters
Query= NC_033705.1
Length=11731
Score E
Sequences producing significant alignments: (Bits) Value
seq1594 116 3e-22
seq1107 87.8 1e-13
seq1774 84.2 2e-12
>seq1594
Length=5600000
Score = 116 bits (128), Expect = 3e-22
Identities = 184/262 (70%), Gaps = 4/262 (2%)
Strand=Plus/Plus
Query 6709 GATTACTCCAAATGGAATAACACTCAACGAGGAAAAGCAAATAATCCTGTCTTTAAAGTT 6768
|| |||||||||||||| ||| |||||||||| |||| ||| | ||||| || || ||
Sbjct 3582934 GACTACTCCAAATGGAACAACCATCAACGAGGAGAAGCCAATGACCCTGTGTTCAAGGTG 3582993
Query 6769 ATGGGTCAATTTTTGGGGTTGCCCAATCTCTTTGTAAGGACTCATGAATTCTTTGAGCAA 6828
||||| ||||||||||| | || ||| | ||| | ||||| || |||||| | |
Sbjct 3582994 ATGGGCCAATTTTTGGGTCTCCCAAATTTGTTTACTCGAACTCACGAGTTCTTTCGG--A 3583051
Query 6829 AGT--TTGATCTATTATAATGAAAGAACAGACTTGATGAGAGTTAGAGGAGGTGAGTTGA 6886
||| ||||||| || || || ||| ||||| | ||||| ||| | || | | |
Sbjct 3583052 AGTCCCTGATCTACTACAAAGATAGACCAGACCTCATGAGGGTTGAATCCGGGAAAGTCA 3583111
Query 6887 TACCAACGACGGATGCTAAAGTCTGTTGGAATGGTCAATTGGGAGGATTAGAGGGCCTGA 6946
|| | || || || || |||||||| || ||| || || |||||||||||
Sbjct 3583112 TAAATGCAACAGAACATATCGTTTGTTGGAAGGGCCAAGCAGGCGGGCTAGAGGGCCTGC 3583171
Query 6947 GACAGAAGGGGTGGAGTGTAGT 6968
| || || || ||||| || ||
Sbjct 3583172 GCCAAAAAGGATGGAGCGTTGT 3583193
>seq1107
Length=3620151
Score = 87.8 bits (96), Expect = 1e-13
Identities = 190/281 (68%), Gaps = 5/281 (2%)
Strand=Plus/Minus
Query 6693 ATTA-GCCAATCATTTTGATTACTCCAAATGGAATAACACTCAACGAGGAAAAGCAAATA 6751
|||| || ||||| |||||||||| || ||||||||| || |||||| | || ||
Sbjct 2214818 ATTACGCGAATCACCTTGATTACTCAAAGTGGAATAACCACCAGCGAGGAGAGGCGAACG 2214759
Query 6752 ATCCTGTCTTTAAAGTTATGGGTCAATTTTTGGGGTTGCCCAATCTCTTTGTAAGGACTC 6811
| || || |||| || ||||||||||| ||||| | || || || || |||| |
Sbjct 2214758 ACCCGGTGTTTAGGGTCATGGGTCAATTCCTGGGGCTCCCGAACCTGTTCACTCGGACCC 2214699
Query 6812 ATGAATTCTTTGAGCAAAGTTTGATCTATTATAATGAAAGAACAGACTTGATGAGAGTTA 6871
|||| ||||| || || | ||||||| || || | | ||| ||||||||||
Sbjct 2214698 ATGAGTTCTTCAAGAAATCCCTTGTCTATTACAAAGACCGGCCGGACCTGATGAGAGTGG 2214639
Query 6872 GAGGAGGTGAGTTGATACCAA--CGACGGATGCTAAAGTCTGTTGGAATGGTCAATTGGG 6929
| || || | || ||| | || || | || || ||| | || ||| ||
Sbjct 2214638 AATCTGGAAAGGTCAT--CAATGCCACCGAAAACATCGTTTGCTGGGAGGGCCAAGCCGG 2214581
Query 6930 AGGATTAGAGGGCCTGAGACAGAAGGGGTGGAGTGTAGTCA 6970
||| | || || || |||||||||| |||||||| ||||
Sbjct 2214580 CGGACTGGAAGGGCTACGACAGAAGGGATGGAGTGTGGTCA 2214540
>seq1774
Length=2904822
Score = 84.2 bits (92), Expect = 2e-12
Identities = 189/281 (67%), Gaps = 5/281 (2%)
Strand=Plus/Minus
Query 6693 ATTA-GCCAATCATTTTGATTACTCCAAATGGAATAACACTCAACGAGGAAAAGCAAATA 6751
|||| || ||||| | |||||||| || ||||||||| || |||||| | || ||
Sbjct 1686310 ATTACGCGAATCACCTGGATTACTCAAAGTGGAATAACCACCAGCGAGGAGAGGCGAACG 1686251
Query 6752 ATCCTGTCTTTAAAGTTATGGGTCAATTTTTGGGGTTGCCCAATCTCTTTGTAAGGACTC 6811
| || || |||| || ||||||||||| ||||| | || || || || |||| |
Sbjct 1686250 ACCCGGTGTTTAGGGTCATGGGTCAATTCCTGGGGCTCCCGAACCTGTTCACTCGGACCC 1686191
Query 6812 ATGAATTCTTTGAGCAAAGTTTGATCTATTATAATGAAAGAACAGACTTGATGAGAGTTA 6871
|||| ||||| || || | ||||||| || || | | ||| ||||||||||
Sbjct 1686190 ATGAGTTCTTCAAGAAATCCCTTGTCTATTACAAAGACCGGCCGGACCTGATGAGAGTGG 1686131
Query 6872 GAGGAGGTGAGTTGATACCAA--CGACGGATGCTAAAGTCTGTTGGAATGGTCAATTGGG 6929
| || || | || ||| | || || | || || ||| | || ||| ||
Sbjct 1686130 AATCTGGAAAGGTCAT--CAATGCCACCGAAAACATCGTTTGCTGGGAGGGCCAAGCCGG 1686073
Query 6930 AGGATTAGAGGGCCTGAGACAGAAGGGGTGGAGTGTAGTCA 6970
||| | || || || |||||||||| |||||||| ||||
Sbjct 1686072 CGGACTGGAAGGGCTACGACAGAAGGGATGGAGTGTGGTCA 1686032
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 37422974816300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |