Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_033731.1 Length=12548 Score E Sequences producing significant alignments: (Bits) Value seq1594 93.3 3e-15 >seq1594 Length=5600000 Score = 93.3 bits (102), Expect = 3e-15 Identities = 121/163 (74%), Gaps = 6/163 (4%) Strand=Plus/Plus Query 6462 CTAACCACTTAGATTACGAGAAATGGAACAATCACCAA--AGGAAGGAATCAAATGATCC 6519 |||||||| |||| ||| ||||||||||| || ||| |||| ||| | ||||| || Sbjct 3582923 CTAACCACCTAGACTACTCCAAATGGAACAACCATCAACGAGGA--GAAGCCAATGACCC 3582980 Query 6520 TGTATTCAGAGTGATGGGTCAATTTTTGGGAAAGCCTAACTTATTCACTAGGACACATGA 6579 ||| |||| |||||||| ||||||||||| || || || || ||| | || || || Sbjct 3582981 TGTGTTCAAGGTGATGGGCCAATTTTTGGGTCTCCCAAATTTGTTTACTCGAACTCACGA 3583040 Query 6580 GTT-TTTCGAGAAATCGTTGATTTATTATGTTGATAGACCTGA 6621 ||| ||||| ||| || |||| || || |||||||| || Sbjct 3583041 GTTCTTTCG-GAAGTCCCTGATCTACTACAAAGATAGACCAGA 3583082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40037303198080