Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1508 309 5e-82 seq2431 306 6e-81 seq2091 306 6e-81 seq1371 306 6e-81 >seq1508 Length=16689 Score = 309 bits (342), Expect = 5e-82 Identities = 225/257 (88%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 527 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 468 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| || || ||||||| ||||||||| || || Sbjct 467 CCTGTTATTGCCTCAAACTTCCATCTACTTGACATAGATAGTCCTTCTAAGAAGGCA-CC 409 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| | | | | | | |||||||| || ||||||||||||||||||||| |||||| Sbjct 408 GCCAGCAAATG-CTAGCGTGCTATTTAAAAG-TTAAGGTCTCGTTCGTTATCGCAATTAA 351 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 350 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 291 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 290 AGAGCTCTCAATCTGTC 274 Score = 306 bits (338), Expect = 6e-81 Identities = 226/259 (87%), Gaps = 6/259 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 14461 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 14402 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--G 119 |||||||||||||||||||||||| || || ||||||| ||||||||| || | Sbjct 14401 CCTGTTATTGCCTCAAACTTCCATCTACTTGACATAGATAGTCCTTCTAAGAAGGCACCG 14342 Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 ||| ||| || | | | | ||||||| || ||||||||||||||||||||| |||| Sbjct 14341 CCAGCAA--ATGCTAGC-GTGCCTATTTAAAAG-TTAAGGTCTCGTTCGTTATCGCAATT 14286 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 14285 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 14226 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 14225 AAAGAGCTCTCAATCTGTC 14207 Score = 304 bits (336), Expect = 2e-80 Identities = 227/260 (87%), Gaps = 6/260 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 7512 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 7453 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--G 119 |||||||||||||||||||||||| || || ||||||| ||||||||| || | Sbjct 7452 CCTGTTATTGCCTCAAACTTCCATCTACTTGACATAGATAGTCCTTCTAAGAAGGCACCG 7393 Query 120 CCACCAACCA-TAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 ||| ||| ||| || | | ||||||| || ||||||||||||||||||||| ||| Sbjct 7392 CCAGCAAATGCTAG-CGC-GTGCCTATTTAAAAG-TTAAGGTCTCGTTCGTTATCGCAAT 7336 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 ||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 7335 TAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAA 7276 Query 239 GAAAGAGCTATCAATCTGTC 258 ||||||||| |||||||||| Sbjct 7275 GAAAGAGCTCTCAATCTGTC 7256 >seq2431 Length=8670 Score = 306 bits (338), Expect = 6e-81 Identities = 226/259 (87%), Gaps = 6/259 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 5351 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 5292 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--G 119 |||||||||||||||||||||||| || || ||||||| ||||||||| || | Sbjct 5291 CCTGTTATTGCCTCAAACTTCCATCTACTTGACATAGATAGTCCTTCTAAGAAGGCACCG 5232 Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 ||| ||| || | | | | ||||||| || ||||||||||||||||||||| |||| Sbjct 5231 CCAGCAA--ATGCTAGC-GTGCCTATTTAAAAG-TTAAGGTCTCGTTCGTTATCGCAATT 5176 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 5175 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 5116 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 5115 AAAGAGCTCTCAATCTGTC 5097 >seq2091 Length=11107 Score = 306 bits (338), Expect = 6e-81 Identities = 226/259 (87%), Gaps = 6/259 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2020 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 2079 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--G 119 |||||||||||||||||||||||| || || ||||||| ||||||||| || | Sbjct 2080 CCTGTTATTGCCTCAAACTTCCATCTACTTGACATAGATAGTCCTTCTAAGAAGGCACCG 2139 Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 ||| ||| || | | | | ||||||| || ||||||||||||||||||||| |||| Sbjct 2140 CCAGCAA--ATGCTAGC-GTGCCTATTTAAAAG-TTAAGGTCTCGTTCGTTATCGCAATT 2195 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 2196 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 2255 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 2256 AAAGAGCTCTCAATCTGTC 2274 Score = 306 bits (338), Expect = 6e-81 Identities = 226/259 (87%), Gaps = 6/259 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 9026 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 9085 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--G 119 |||||||||||||||||||||||| || || ||||||| ||||||||| || | Sbjct 9086 CCTGTTATTGCCTCAAACTTCCATCTACTTGACATAGATAGTCCTTCTAAGAAGGCACCG 9145 Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 ||| ||| || | | | | ||||||| || ||||||||||||||||||||| |||| Sbjct 9146 CCAGCAA--ATGCTAGC-GTGCCTATTTAAAAG-TTAAGGTCTCGTTCGTTATCGCAATT 9201 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 9202 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 9261 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 9262 AAAGAGCTCTCAATCTGTC 9280 >seq1371 Length=18563 Score = 306 bits (338), Expect = 6e-81 Identities = 226/259 (87%), Gaps = 6/259 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 7675 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 7734 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--G 119 |||||||||||||||||||||||| || || ||||||| ||||||||| || | Sbjct 7735 CCTGTTATTGCCTCAAACTTCCATCTACTTGACATAGATAGTCCTTCTAAGAAGGCACCG 7794 Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 ||| ||| || | | | | ||||||| || ||||||||||||||||||||| |||| Sbjct 7795 CCAGCAA--ATGCTAGC-GTGCCTATTTAAAAG-TTAAGGTCTCGTTCGTTATCGCAATT 7850 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 7851 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 7910 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 7911 AAAGAGCTCTCAATCTGTC 7929 Score = 306 bits (338), Expect = 6e-81 Identities = 226/259 (87%), Gaps = 6/259 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 14662 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 14721 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--G 119 |||||||||||||||||||||||| || || ||||||| ||||||||| || | Sbjct 14722 CCTGTTATTGCCTCAAACTTCCATCTACTTGACATAGATAGTCCTTCTAAGAAGGCACCG 14781 Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 ||| ||| || | | | | ||||||| || ||||||||||||||||||||| |||| Sbjct 14782 CCAGCAA--ATGCTAGC-GTGCCTATTTAAAAG-TTAAGGTCTCGTTCGTTATCGCAATT 14837 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 14838 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 14897 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 14898 AAAGAGCTCTCAATCTGTC 14916 Score = 284 bits (314), Expect = 2e-74 Identities = 225/265 (85%), Gaps = 9/265 (3%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 667 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 726 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCT--AAGAAGCCAG 119 |||||||||||||||||||||||| || | | |||||||||| |||||| Sbjct 727 CCTGTTATTGCCTCAAACTTCCATCTATTGACATAGA-TAGTCCCTCTCTAAGAAGTGCA 785 Query 120 CC--ACCAACCAT-AGTCGATGGGGC---TATTTAGCAGGTTAAGGTCTCGTTCGTTATC 173 || | ||||| | | | | | ||||||| ||||||||||||||||||||||| Sbjct 786 CCGGAAAAACCAGCAAATGCTAGCACCACTATTTAGTAGGTTAAGGTCTCGTTCGTTATC 845 Query 174 GGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGA 233 | |||||| ||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 846 GCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAA 905 Query 234 ATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||| |||||||||| Sbjct 906 ATCAAGAAAGAGCTCTCAATCTGTC 930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796776356703