Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq2091 183 3e-44 seq1508 183 3e-44 seq1371 183 3e-44 seq2431 176 5e-42 >seq2091 Length=11107 Score = 183 bits (202), Expect = 3e-44 Identities = 155/187 (83%), Gaps = 3/187 (2%) Strand=Plus/Minus Query 4 ACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACA 62 |||||||| ||||||||||||||||||||| ||||||||||||| | ||||||||||| | Sbjct 2770 ACCAGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCATATTGCTCGAATATA 2711 Query 63 TTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC 122 ||| |||||||||| ||||||||| |||||||||| || ||||| || ||| Sbjct 2710 TTAGCATGGAATAAGGGAATAGGACAAT-GGTTCTATTTCGTTGGTTTTCAGTACCATT- 2653 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||| | |||||| ||||||||| | |||| ||||||||||||| Sbjct 2652 GTAATGATTAATAGGGACGGACGGGGGCATCAGTATTCCGTAGTCAGAGGTGAAATTCTT 2593 Query 183 GGATTTA 189 ||||||| Sbjct 2592 GGATTTA 2586 Score = 178 bits (196), Expect = 1e-42 Identities = 153/187 (82%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 4 ACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACA 62 |||||||| ||||||||||||||||||||| ||||||||||||| | ||||||||||| | Sbjct 9777 ACCAGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCATATTGCTCGAATATA 9718 Query 63 TTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC 122 ||| |||||||||| ||||||| |||||||||| || ||||| || ||| Sbjct 9717 TTAGCATGGAATAAGGGAATAGGGACAATGGTTCTATTTCGTTGGTTTTCAGTACCATT- 9659 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||| | |||||| ||||||||| | |||| ||||||||||||| Sbjct 9658 GTAATGATTAATAGGGACGGACGGGGGCATCAGTATTCCGTAGTCAGAGGTGAAATTCTT 9599 Query 183 GGATTTA 189 ||||||| Sbjct 9598 GGATTTA 9592 >seq1508 Length=16689 Score = 183 bits (202), Expect = 3e-44 Identities = 155/187 (83%), Gaps = 3/187 (2%) Strand=Plus/Plus Query 4 ACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACA 62 |||||||| ||||||||||||||||||||| ||||||||||||| | ||||||||||| | Sbjct 6760 ACCAGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCATATTGCTCGAATATA 6819 Query 63 TTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC 122 ||| |||||||||| ||||||||| |||||||||| || ||||| || ||| Sbjct 6820 TTAGCATGGAATAAGGGAATAGGACAAT-GGTTCTATTTCGTTGGTTTTCAGTACCATT- 6877 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||| | |||||| ||||||||| | |||| ||||||||||||| Sbjct 6878 GTAATGATTAATAGGGACGGACGGGGGCATCAGTATTCCGTAGTCAGAGGTGAAATTCTT 6937 Query 183 GGATTTA 189 ||||||| Sbjct 6938 GGATTTA 6944 Score = 181 bits (200), Expect = 1e-43 Identities = 156/188 (83%), Gaps = 4/188 (2%) Strand=Plus/Plus Query 4 ACCAGGAC-TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATAC 61 |||||||| |||||||||||||||||||||| ||||||||||||| | ||||||||||| Sbjct 13710 ACCAGGACGTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCATATTGCTCGAATAT 13769 Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 |||| |||||||||| ||||||||| |||||||||| || ||||| || ||| Sbjct 13770 ATTAGCATGGAATAAGGGAATAGGACAAT-GGTTCTATTTCGTTGGTTTTCAGTACCATT 13828 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||||||| |||| ||| | |||||| ||||||||| | |||| |||||||||||| Sbjct 13829 -GTAATGATTAATAGGGACGGACGGGGGCATCAGTATTCCGTAGTCAGAGGTGAAATTCT 13887 Query 182 TGGATTTA 189 |||||||| Sbjct 13888 TGGATTTA 13895 >seq1371 Length=18563 Score = 183 bits (202), Expect = 3e-44 Identities = 155/187 (83%), Gaps = 3/187 (2%) Strand=Plus/Minus Query 4 ACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACA 62 |||||||| ||||||||||||||||||||| ||||||||||||| | ||||||||||| | Sbjct 8425 ACCAGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCATATTGCTCGAATATA 8366 Query 63 TTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC 122 ||| |||||||||| ||||||||| |||||||||| || ||||| || ||| Sbjct 8365 TTAGCATGGAATAAGGGAATAGGACAAT-GGTTCTATTTCGTTGGTTTTCAGTACCATT- 8308 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||| | |||||| ||||||||| | |||| ||||||||||||| Sbjct 8307 GTAATGATTAATAGGGACGGACGGGGGCATCAGTATTCCGTAGTCAGAGGTGAAATTCTT 8248 Query 183 GGATTTA 189 ||||||| Sbjct 8247 GGATTTA 8241 Score = 183 bits (202), Expect = 3e-44 Identities = 155/187 (83%), Gaps = 3/187 (2%) Strand=Plus/Minus Query 4 ACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACA 62 |||||||| ||||||||||||||||||||| ||||||||||||| | ||||||||||| | Sbjct 15412 ACCAGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCATATTGCTCGAATATA 15353 Query 63 TTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC 122 ||| |||||||||| ||||||||| |||||||||| || ||||| || ||| Sbjct 15352 TTAGCATGGAATAAGGGAATAGGACAAT-GGTTCTATTTCGTTGGTTTTCAGTACCATT- 15295 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||| | |||||| ||||||||| | |||| ||||||||||||| Sbjct 15294 GTAATGATTAATAGGGACGGACGGGGGCATCAGTATTCCGTAGTCAGAGGTGAAATTCTT 15235 Query 183 GGATTTA 189 ||||||| Sbjct 15234 GGATTTA 15228 Score = 174 bits (192), Expect = 2e-41 Identities = 156/189 (83%), Gaps = 5/189 (3%) Strand=Plus/Minus Query 4 ACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAA-TAC 61 |||||||| ||||||||||||||||||||| ||||||||||||| | ||||||||| || Sbjct 1425 ACCAGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCATATTGCTCGAAATAT 1366 Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTT-GTAGGTTTCTAGGACCGC 120 |||| |||||||||| ||||||||| ||||||||||| || ||||| || ||| Sbjct 1365 ATTAGCATGGAATAAGGGAATAGGACAAT-GGTTCTATTTTCGTTGGTTTTCAGTACCAT 1307 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||| |||| ||| | |||||| ||||||||| | |||| ||||||||||| Sbjct 1306 T-GTAATGATTAATAGGGACGGACGGGGGCATCAGTATTCCGTAGTCAGAGGTGAAATTC 1248 Query 181 TTGGATTTA 189 ||||||||| Sbjct 1247 TTGGATTTA 1239 >seq2431 Length=8670 Score = 176 bits (194), Expect = 5e-42 Identities = 155/188 (82%), Gaps = 4/188 (2%) Strand=Plus/Plus Query 4 ACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACA 62 |||||||| ||||||||||||||||||||| ||||||||||||| | ||||||||||| | Sbjct 4600 ACCAGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCATATTGCTCGAATATA 4659 Query 63 TTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC 122 ||| |||||||||| ||||||||| |||||||||| || ||||| || ||| Sbjct 4660 TTAGCATGGAATAAGGGAATAGGAC-AATGGTTCTATTTCGTTGGTTTTCAGTACC-ATT 4717 Query 123 GTAATGATAAATACGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||||||| |||| ||| | | ||||| ||||||||| | |||| |||||||||||| Sbjct 4718 GTAATGATTAATAGGGACGGACGGGGGGCATCAGTATTCCGTAGTCAGAGGTGAAATTCT 4777 Query 182 TGGATTTA 189 |||||||| Sbjct 4778 TGGATTTA 4785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511984807520