Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq146 113 6e-20 >seq146 Length=372164 Score = 113 bits (124), Expect = 6e-20 Identities = 225/328 (69%), Gaps = 4/328 (1%) Strand=Plus/Plus Query 162502 CCCCAGAAAGAAACCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAAACTATAT 162561 || |||| |||||||| || | ||||| |||| ||||||| | ||||||||| || Sbjct 170099 CCACAGACTGAAACCACCCCGTTTTATCCCAGATCGCCTTATGCATGTGCTAAACTGTAC 170158 Query 162562 GGGTTCTGGATCATCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAGCGGTATT 162621 | | ||||||| || || || ||||| |||| || ||| | || |||||| Sbjct 170159 GCTTACTGGATCGTCGTTAATTATAGGGAGGCTTATGGTATGTTTGCGTGTAATGGTATT 170218 Query 162622 CTATTCAATCACGAAAG-CTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATCGTCCG 162680 | || ||||| ||||| | || || ||||||||||||| || || | || || | Sbjct 170219 TTGTTTAATCATGAAAGTCCCAGGC-GAGGAGAGACGTTTGTTACCAGAAAAATTACAAG 170277 Query 162681 AGCCTTGTCCCGAATTAGTGTGGGACTC-CAAAGTGATCTACAACTTGGAAACCTCAATG 162739 | || || || ||||| | | ||| | | |||| || || || || Sbjct 170278 GGAAGTGGCCAAGATCCACTTGGGATTATCGCAGTTTT-TGGAACTGGGTAATCTAGATT 170336 Query 162740 CCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTTCAGC 162799 || | | ||||||||||| || ||||||||||| || ||||||||| ||||||| || | Sbjct 170337 CCAAAAGAGACTGGGGACATGCTAAAGACTACGTTGAAGCTATGTGGATGATGCTACAAC 170396 Query 162800 AAGAGAAGCCAGATGATTATGTGATCGC 162827 |||| |||||||||| ||| || || Sbjct 170397 AAGAATCACCAGATGATTTTGTAATTGC 170424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691432725755880