Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq85 407 2e-111 >seq85 Length=903118 Score = 407 bits (450), Expect = 2e-111 Identities = 246/256 (96%), Gaps = 3/256 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 888340 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 888397 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 888398 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 888457 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 888458 CCCGGACCTGTCGGCCAAGGCTATAAACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 888517 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 888518 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGCGGCCTAAAAG 888577 Query 241 GCCAT-CTCCCTCGAA 255 ||| | |||||| || Sbjct 888578 GCCGTAGTCCCTCTAA 888593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751970947420