Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq85 233 4e-59 >seq85 Length=903118 Score = 233 bits (258), Expect = 4e-59 Identities = 203/248 (82%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 889233 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 889174 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | |||| ||||| ||||| | ||| || |||||||| Sbjct 889173 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGAT 889115 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 889114 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 889055 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 889054 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 888996 Query 311 GTTAGGGG 318 ||| |||| Sbjct 888995 GTTGGGGG 888988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915163501824