Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq85 221 5e-55 >seq85 Length=903118 Score = 221 bits (244), Expect = 5e-55 Identities = 220/281 (78%), Gaps = 3/281 (1%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 || ||||||||| ||||||||||||||||||| |||| | ||||||| ||| | | Sbjct 886906 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCGAGTA 886847 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522 ||||||| | || || ||| ||| || | |||| | ||||||| | |||| Sbjct 886846 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGTGATCCCCCCGAG-GGGTGCAACGCCGAC 886788 Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582 ||| | ||| | | || || ||||||| ||||||| |||| ||||||||||||||| Sbjct 886787 CGACCTCGATCTTCTGAGAAGGGTTTGAGTGTGAGCATACCTGTCGGGACCCGAAAGATG 886728 Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642 ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | Sbjct 886727 GTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA 886668 Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 886667 CTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 886627 Score = 158 bits (174), Expect = 5e-36 Identities = 134/165 (81%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 ||| ||||||| |||||||||||||||||| | || ||| |||||||| | || || || Sbjct 887291 TCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 887232 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||| ||| |||||||||||||| ||||||| | || ||||||||||||| |||| Sbjct 887231 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGAACTT 887172 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||| ||||| ||| || | ||||||||| | ||||||||| Sbjct 887171 TGAAAAAAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 887127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079914457400