Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq85 289 5e-76 seq18 80.6 4e-13 >seq85 Length=903118 Score = 289 bits (320), Expect = 5e-76 Identities = 221/259 (85%), Gaps = 2/259 (1%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 888484 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 888543 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | || ||| | ||||||||||||||||| ||| Sbjct 888544 CCTGTTATTGCCTCAAACTTCCGCGGCCTAAAAGGCCGTAGTCCCTCTAAGAAGCTGGCC 888603 Query 122 ACCAACCA-TAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | | || || |||| |||||||| | ||||||||||||||| ||||||| Sbjct 888604 GCGGAGGGGTACCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATT 888663 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 888664 AACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 888723 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| ||| |||||| Sbjct 888724 AAAGAGCTCTCAGTCTGTC 888742 >seq18 Length=2092535 Score = 80.6 bits (88), Expect = 4e-13 Identities = 73/92 (79%), Gaps = 4/92 (4%) Strand=Plus/Minus Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCA--- 225 |||| | |||||||||| |||| || ||| |||| |||||| ||| ||||||||| Sbjct 2027383 TTATGGAAATTAACCAGTGCAATCGCTTCACTAACTTAGAACGACCACGCACCACCACCC 2027324 Query 226 -CCCATAGAATCAAGAAAGAGCTATCAATCTG 256 |||| |||||||||||||||| ||||| || Sbjct 2027323 ACCCACCGAATCAAGAAAGAGCTCTCAATATG 2027292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796769216628