Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq85 408 7e-112 seq5 152 9e-35 >seq85 Length=903118 Score = 408 bits (452), Expect = 7e-112 Identities = 267/293 (91%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || ||||||||||||||||||||||||||||||| Sbjct 884496 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 884554 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 884555 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 884614 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 884615 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 884674 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 884675 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 884734 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || ||||||||||| |||||||| |||||| |||| |||||| Sbjct 884735 CAAATTCCGAAGGTCTAAAGGATCGTTAGGCCACGCTTTCACGGTTCGTATTC 884787 >seq5 Length=2410826 Score = 152 bits (168), Expect = 9e-35 Identities = 121/144 (84%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 ||| || ||||||||||| | |||| | ||||||| |||| |||||||||||||||| Sbjct 1787501 ATTGGTAGGTGAACAATCTGATGCTTGACAAATTCTGTTTCGCAATGATAGGAAGAGCCG 1787560 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 ||||||||| |||||||| ||||||||||||||||||| | ||||||||||||||||| Sbjct 1787561 ACATCGAAGAATCAAAAAATGACGTCGCTATGAACGCTTGACCGCCACAAGCCAGTTATC 1787620 Query 210 CCTGTGGTAACTTTTCTGGCACCT 233 | || | ||||||||| ||||| Sbjct 1787621 CGGGT-GCAACTTTTCTAACACCT 1787643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854365926528