Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq85 600 4e-169 seq21 174 5e-41 seq2906 136 1e-29 seq340 136 1e-29 seq2488 132 1e-28 seq259 131 5e-28 seq215 105 2e-20 >seq85 Length=903118 Score = 600 bits (664), Expect = 4e-169 Identities = 446/513 (87%), Gaps = 13/513 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| | || |||||| |||| |||||||||||||||||| Sbjct 889456 GTACTCATTCCAATTACCAGACTCTAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 889514 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 889515 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 889574 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| ||||| ||| Sbjct 889575 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATAGTA 889634 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 889635 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCA 889694 Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAG----GG 293 | | |||| |||||| ||| |||||| |||||||| | | ||| | | || | Sbjct 889695 CGAGGGCCGTGCGATCCGTCGAGTTATCATGAATCATC--GCAGCAACGGGCAGAGCCCG 889752 Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATT 352 ||| | ||||||||||||||| || ||||||| ||||||||||||| | ||| ||||| Sbjct 889753 CGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATT 889812 Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412 |||||||||||||| |||||||||| |||| |||||| |||||| |||| |||||||| Sbjct 889813 AGCTCTAGAATTACTACGGTTATCCGAGTAG-CAGGTACCATCAAACAAACTATAACTGA 889871 Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT-ATACTTAGACATGCATGGCT 471 ||||||||||||||||||||||||| || | ||| || ||||||| |||||||||||| Sbjct 889872 TTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTAATTCATACTTACACATGCATGGCT 889931 Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||| Sbjct 889932 TAATCTTTGAGACAAGCATATGACTACTGGCAG 889964 >seq21 Length=1700594 Score = 174 bits (192), Expect = 5e-41 Identities = 137/164 (84%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 37 TATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTG 96 |||| |||| | |||||||||||||| | ||||| ||| ||||| |||| ||||||| Sbjct 1653633 TATCGTTATTGGTCGTCACTACCTCCCCTTACCGGGAGTGGATAATTAGCGCTCCTGCTG 1653692 Query 97 CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCC 156 |||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct 1653693 CCTTCCTTGGATGTGGTAACCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCTTGGTTCC 1653752 Query 157 CCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGA 200 || |||||| || |||||| ||||| | ||||||||||| Sbjct 1653753 CCATTACCCATTACAACCATGTTAGGCGCAGAACCTACCATCGA 1653796 Score = 172 bits (190), Expect = 2e-40 Identities = 115/127 (91%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 37 TATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTG 96 |||| |||| | |||| ||||||||||| ||||| ||||||||| |||||||||||| Sbjct 1330859 TATCGTTATTGTTCGTCAGTACCTCCCCGTAGCGGGAGTGGGTAATTAGCGCGCCTGCTG 1330918 Query 97 CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCC 156 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct 1330919 CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATT-C 1330977 Query 157 CCGTTAC 163 ||||||| Sbjct 1330978 CCGTTAC 1330984 Score = 127 bits (140), Expect = 6e-27 Identities = 99/118 (84%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 37 TATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTG 96 |||| |||| | ||||||||||||| || ||||| || |||||| |||||| | ||| Sbjct 1026843 TATCCTTATTGTTCGTCACTACCTCCCTGTACCGGGAGTGAGTAATTAGCGCGCTTACTG 1026902 Query 97 CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATT 154 | ||| ||||||||||||||||||||||||||||| ||| |||||| ||||||| ||| Sbjct 1026903 CTTTCGTTGGATGTGGTAGCCGTTTCTCAGGCTCCATCTTCGGAATTGAACCCTGATT 1026960 >seq2906 Length=2168 Score = 136 bits (150), Expect = 1e-29 Identities = 96/110 (87%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 37 TATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTG 96 |||| |||| | |||||||||||||||| ||||| ||||||||| | |||||| ||| Sbjct 1878 TATCGCTATTGTTCGTCACTACCTCCCCGTACCGGGAGTGGGTAATTAGAGCGCCTACTG 1937 Query 97 CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAA 146 ||||||||||| ||||||||| |||||||||||||||||||||||| ||| Sbjct 1938 CCTTCCTTGGACGTGGTAGCCATTTCTCAGGCTCCCTCTCCGGAATAGAA 1987 >seq340 Length=455265 Score = 136 bits (150), Expect = 1e-29 Identities = 175/240 (73%), Gaps = 16/240 (7%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| | || | | || | | ||| ||||| | ||||||||| Sbjct 83810 GTACTCATTCCGATTACGGGGCCTCCCACGAATTCCGCATCGTTATTTTTCGTCACTACC 83869 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||| ||| | ||| || || |||||| | ||| |||||| ||||| |||| | | || | Sbjct 83870 TCCCTGTGCCAGGAGTGAGTGATTTGCACACCTACTGCCTCCCTTGAATGTAGCA-CCTT 83928 Query 120 TTCTC-AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178 || || || ||||| |||| ||||||||||||||||| ||||||| Sbjct 83929 TTTTCTAGAATCCCTTTCCG-------------ATTCCCCGTTACCCGTTACAACCATGG 83975 Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 ||||| | ||||||||||| |||||||| |||||| ||||||| || | ||||||| Sbjct 83976 TAGGCGCAGAACCTACCATCGACAGTTGATAAGGCAGACATTTGAAAGATGCGTCGCCGG 84035 >seq2488 Length=9876 Score = 132 bits (146), Expect = 1e-28 Identities = 118/146 (81%), Gaps = 4/146 (3%) Strand=Plus/Plus Query 84 TGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTC---AGGCTCCCTCTCCGGA 140 ||| ||||||||||||||| ||||||| |||| |||||||| |||||||||||| || Sbjct 5400 TGCACGCCTGCTGCCTTCCCTGGATGTAGTAGACGTTTCTCTGATGGCTCCCTCTCCAGA 5459 Query 141 ATCGAACCCTAATTCCCCGTTA-CCCGTTGATACCATGGTAGGCCACTATCCTACCATCG 199 |||||||||| ||| | |||| |||||| | |||| ||| | | |||||||||| Sbjct 5460 ATCGAACCCTGATTAACTGTTACCCCGTTACAATCATGATAGACGTAGAACCTACCATCG 5519 Query 200 AAAGTTGATAGGGCAGAAATTTGAAT 225 | |||||||| |||||| |||||||| Sbjct 5520 ACAGTTGATAAGGCAGACATTTGAAT 5545 >seq259 Length=467413 Score = 131 bits (144), Expect = 5e-28 Identities = 101/119 (85%), Gaps = 7/119 (6%) Strand=Plus/Plus Query 37 TATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTG 96 |||| |||| | |||||||||||||||| |||| ||||| ||||| |||||| Sbjct 200295 TATCGTTATTGTTCGTCACTACCTCCCCGTACCGGG------TAATTAGCGCGTCTGCTG 200348 Query 97 CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTC 155 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 200349 CCTTC-TTGGATCTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTC 200406 >seq215 Length=733663 Score = 105 bits (116), Expect = 2e-20 Identities = 103/132 (78%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 149 CTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGAT 208 || ||||||||||||||||| |||||||||||| | ||||||||||| ||||||| Sbjct 241417 CTGATTCCCCGTTACCCGTTACAACCATGGTAGGCGCAGAACCTACCATCGACAGTTGAT 241358 Query 209 AGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGAT--TCGTTAAGTTAT 266 | |||||| ||||||| || | ||||||| | || ||||||||| | ||||||| Sbjct 241357 AAGGCAGACATTTGAAAGATGCGTCGCCGGTGCGAGACCATGCGATCAGCAGAAAGTTAT 241298 Query 267 TATGAATCACCA 278 | || |||||| Sbjct 241297 TCAGATTCACCA 241286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510339765248