Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq12 318 5e-82 seq310 201 9e-47 >seq12 Length=2314596 Score = 318 bits (352), Expect = 5e-82 Identities = 618/902 (69%), Gaps = 23/902 (3%) Strand=Plus/Plus Query 61041 AGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTA 61100 ||| ||||| | | |||||| | || || || | ||| || |||||| | ||| Sbjct 281197 AGAAAATCCAAGAAGGTTCGTAATATTTCCTATTCAATATCCAGACATTTGGGAAAAGTA 281256 Query 61101 CAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAA 61160 ||| | || ||||||||||||||||| || || || || | || || ||| | Sbjct 281257 CAAGGAAGCTGAAGCTTCCTTCTGGACAACAGAAGAAGTAGACCTTTCTAAGGACCTTGC 281316 Query 61161 TGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTT 61220 ||||||| || || | | |||| ||||||||| |||||| | || || || Sbjct 281317 CCACTGGGATAAGTTGTCAAATGATGAAAGGCATTTCATTTCACATGTACTTGCCTTTTT 281376 Query 61221 TGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCA 61280 ||| || || || || || || ||||| || | | || | ||| || || || || Sbjct 281377 TGCTGCATCTGATGGAATTGTAAATGAAAACCTTGTAGAGAGATTCAGTCAAGAAGTACA 281436 Query 61281 AGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGA 61340 ||| | ||||| ||||| || || || ||||| |||||||| || ||| |||| || || Sbjct 281437 AGTAACTGAGGCTCGTTGCTTTTATGGTTTCCAAATTGCCATTGAAAATATCCATTCAGA 281496 Query 61341 GATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGT- 61399 ||||| ||| |||||| || || || || || | | ||| | ||| || | | Sbjct 281497 AATGTATAGTACTCTCATTGACACTTATATATTTGACC---CAGAA-GAGAAAGAATTTC 281552 Query 61400 ---TCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGC-CTTCAAT 61455 ||||||| || || || || || || ||| ||| || |||||||| ||||| | Sbjct 281553 TTTTCAATGCTATTGAAACCATGCCTTGTGTTAAGAAGAAGGCTGATTGGGCTCTTCA-T 281611 Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515 ||||||| ||||| | || ||||| |||||| | | |||||||| | || || Sbjct 281612 TGGATCAGCAGTAAGAATGCAACATTCCCAGAACGAGTTGTTGCATTTGCAGCTGTGGAA 281671 Query 61516 GGTGTATT--TTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTA 61573 || | || |||||| || ||||| || ||||||||| | |||||||| || |||| Sbjct 281672 GGAATTTTCTTTTCAG--GAAGTTTTGCTGCTATCTTTTGGCTCAAGAAACGGGGTCTTA 281729 Query 61574 TGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATT 61633 |||| || ||||| || |||||| | || || ||||| || || |||||||||||| Sbjct 281730 TGCCAGGACTGACATTTTCTAATGAGCTTATTTCTCGCGATGAAGGTTTGCATTGTGATT 281789 Query 61634 TTGC-TGTTT--TGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGG 61690 |||| ||||| || | ||| ||| | || | || || | ||||| || Sbjct 281790 TTGCTTGTTTAATG-TTTTC-----TTATATTGTTCAAAAACCATCAAAAGAGCGAGTAA 281843 Query 61691 GTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCG 61750 || || |||| || || || | || |||||||||||| | ||||| |||||||| | Sbjct 281844 CAGATATAATTCGCGATGCAGTTAAAATTGAACAGGAATTTTTAACTGATGCTTTGCCTG 281903 Query 61751 TCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACC 61810 | || || || |||||||| ||| ||||| |||||||| |||||||| || |||| Sbjct 281904 TAAGCCTAATTGGTATGAATTGCAAACTGATGTCTCAGTATATCGAATTTGTAGCTGACC 281963 Query 61811 GTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCA 61870 |||| || || || |||||| | ||| |||||| || || || ||||| || | Sbjct 281964 GTCTTTTAGTAGAGTTGGGTTGTGATAAGATTTATAATGTTAAGAATCCGTTTGACTTTA 282023 Query 61871 TGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATC 61930 || ||| ||||| ||||||||||| ||||| || || || ||||| || |||| Sbjct 282024 TGAACAAAATTTCCACTGATGGCAAGACAAATTTCTTTGAAAAGAAAGTAGGTGAATATC 282083 Query 61931 AA 61932 || Sbjct 282084 AA 282085 >seq310 Length=366558 Score = 201 bits (222), Expect = 9e-47 Identities = 434/644 (67%), Gaps = 14/644 (2%) Strand=Plus/Plus Query 66008 GCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCG 66067 ||||| ||||| | || ||||| || | |||||||| | ||||| || |||||||| Sbjct 101424 GCAAGCGATGCCAAATTACAGACCGCAACTTCGTCAGGGGAAGTATATTCAACAATTTCT 101483 Query 66068 GTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCAT 66127 ||||| | ||| |||| | || || || || || |||||||| || || | |||||| Sbjct 101484 GTGCATAAATTGCTGCTTCTAATTGTTCCTAAGTTTTGTTGATTGCTTTTTCTGTTGCAT 101543 Query 66128 GCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGC 66187 ||||| || || | |||| | ||||| || || || ||||| || |||| || || ||| Sbjct 101544 GCATCTTTATATAGCATGAAAGGAGTCCCAGTTTCGACTTGAGAAACAATTATAGCATGC 101603 Query 66188 CAAA------GAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTT-TGCGTTCGTAATG 66240 || | |||| || | || | | ||| |||||| ||| ||| || | Sbjct 101604 CACAATTTCTGAGCAGGTAC-TTGAGAA-ATGTATT----TACCTTCTGC-TTCATACTT 101656 Query 66241 TTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGG 66300 ||| || | ||||| || ||| ||||| ||| | || | ||||| | || || Sbjct 101657 TTCATACAACTGTTCAAACTTTTCTCCCCAATTATCGTAAAGTCCGGGACATTGATGAGG 101716 Query 66301 ACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCA 66360 ||||||||| ||||| | |||| ||||| || | |||||| | ||| |||||||| Sbjct 101717 ACACATCAGTGACCAGTGCCCATTTTGTTCAACTCTTTTCATAAACAAATCTGGTATCCA 101776 Query 66361 GAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTC 66420 ||||| || || | ||| | ||||| ||| || | || |||||| ||| | Sbjct 101777 TAGGGCATAAAACAAATCTCTTGCTCTCATCTCTTCTTTTCCTGTATTTTTTTTCAAATT 101836 Query 66421 GAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACG 66480 | || ||||| ||||| |||||||||||||| || ||||| || || | || | Sbjct 101837 TAAAAATTCAAATATGTCTGCATGCCATGGTTCAAGATAGATAGCAAAAGCACCAGGTCT 101896 Query 66481 TTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTAC 66540 ||| || ||||| || || || | || | ||| || || ||||| | ||| || || Sbjct 101897 CTTGTTACCTCCTTGATCTACATATCTGGCTAAATTATTAAAAACACGAAGCATAGGAAC 101956 Query 66541 GAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTG 66600 | ||||| || |||| |||||||| | ||| ||| || ||||||| ||| Sbjct 101957 TAAACCGTTCGAAGTGCCGTTGGTGCCTGCTATGAAACTACCTTTAGCACGTATATTGTG 102016 Query 66601 AACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCAC 66644 || | | || | |||||| |||| || || ||| ||||| Sbjct 102017 CACGCTTATGCCCAAACCACCTGCCGATTTAGAAATGAGAGCAC 102060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397548676704320