Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= AAMG01000056.1 Length=332 Score E Sequences producing significant alignments: (Bits) Value seq169649 91.5 3e-16 >seq169649 Length=304 Score = 91.5 bits (100), Expect = 3e-16 Identities = 155/216 (72%), Gaps = 9/216 (4%) Strand=Plus/Plus Query 105 GGATTTGCCTGCGGAAATCAACGTCTACACTCTTTAACCGGCTATTCCGTCAGCCGGCGG 164 |||||||||| | ||||| | |||||| ||| |||| ||||||| ||| ||| Sbjct 85 GGATTTGCCTAAG-AAATCTCC--CTACACGCTTGAACCACCTATTCCAACAGATGGCTT 141 Query 165 CGTTGTCACTCCTGCGTCCCCACGTCACCCTCAAATGTAGTAAC-GGAATACTAACC-GT 222 || | || || ||||||||| || | | | || || || |||||| ||||| || Sbjct 142 GCTTAAC-CTTCTCCGTCCCCACATCGCA-TGATATTCAGGTACAGGAATATTAACCTGT 199 Query 223 TTCTGCCATCGGTCTCGCCGTTCGGCTGAACCTTATGACCCGACTTACCCTGATCCGATT 282 ||| |||||| ||| ||| || ||||| | |||||| |||||| |||||| Sbjct 200 TTC--CCATCGACTACGCATTTCTGCCTCGCCTTAGGGGCCGACTCACCCTGTTCCGATG 257 Query 283 AGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGG 318 | || ||| ||||||||||| | ||||||||||||| Sbjct 258 AACGTTGAACAGGAAACCTTGGGCTTTCGGCGAGGG 293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 955848086400