Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq293877 89.7 8e-16 seq186820 78.8 1e-12 >seq293877 Length=503 Score = 89.7 bits (98), Expect = 8e-16 Identities = 60/66 (91%), Gaps = 1/66 (2%) Strand=Plus/Minus Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||||||||||| ||||| |||||||||||||||||||||||||||||||||| || Sbjct 249 CCTTCAGTGTAGCGAGCGTGTTGCCCAGAACATCTAAGGGCATCACAGACCTGTTACTG- 191 Query 73 CTCAAA 78 |||||| Sbjct 190 CTCAAA 185 >seq186820 Length=322 Score = 78.8 bits (86), Expect = 1e-12 Identities = 134/186 (72%), Gaps = 14/186 (8%) Strand=Plus/Minus Query 30 GTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCAT-TGG 88 |||| |||||||||||||||||||||||||| | ||||||| | |||| || | | | Sbjct 227 GTGCTGCCCAGAACATCTAAGGGCATCACAGGCATGTTATTTC-TCAATCTCGCTTGTCC 169 Query 89 CTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATA-----GTCGAT--GGGG 141 || ||| || ||| | | | ||| | || || || |||| | | | Sbjct 168 CTCTAAG--AAGAGTTGATATT-GTCGCC-GACAGCAGGAATGCGGATGTCGTTTCGCGA 113 Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||| || || |||||||||||||||||||||||| ||||| || |||||||| Sbjct 112 CTAGTTAGAAGCCAGAG-TCTCGTTCGTTATCGGAATTAACCCGACAAGTCGCTCCACCA 54 Query 202 ACTAAG 207 |||||| Sbjct 53 ACTAAG 48 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793461601971