Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq6161 145 2e-32 >seq6161 Length=202 Score = 145 bits (160), Expect = 2e-32 Identities = 139/173 (80%), Gaps = 4/173 (2%) Strand=Plus/Minus Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309 |||||||||||||| | |||||||||| | ||||||||||||||| || |||||||| Sbjct 172 CTCCCACTGCTTGTCAGATTACGGTTTCATGCGCTATTTCACTCCCCT-TCAGGGGTTCT 114 Query 310 -TTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTT- 367 |||| |||||||||| ||||||| ||| |||||||||| |||| ||||||||||||| Sbjct 113 CTTTCACCTTTCCCTCGCGGTACTTCTTCGCTATCGGTCACTCAGGAGTATTTAGCCTTA 54 Query 368 GGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 |||| |||||| | | ||||| || ||| | |||| || | ||||||| Sbjct 53 CGAGG-TGGTCCTCGCTGATTCACACGGGGTTCCACGTGTCCCATGCTACTCG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1236230191744