Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq102020 82.4 5e-14 seq102021 73.4 2e-11 >seq102020 Length=250 Score = 82.4 bits (90), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 || |||||| |||| || ||||||||| || |||||||| |||||||||||||||||||| Sbjct 85 CTTACTAAGTCATT-CAGTCGGTAGTA-GCAACGGGCGGTGTGTACAAAGGGCAGGGACG 142 Query 109 TAATACAACGCAAGCT 124 |||| ||| || |||| Sbjct 143 TAAT-CAATGCGAGCT 157 >seq102021 Length=250 Score = 73.4 bits (80), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 || ||||| |||| || ||||||||| || |||||||| ||||||||||||||||||| Sbjct 85 CTTACTAAATCATT-CAGTCGGTAGTA-GCAACGGGCGGTGTGTACAAAGGGCAGGGACT 142 Query 109 TAATACAACGCAAGCT 124 |||| ||| || |||| Sbjct 143 TAAT-CAATGCGAGCT 157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299580375380