Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq23823 168 2e-39 seq260259 93.3 1e-16 >seq23823 Length=210 Score = 168 bits (186), Expect = 2e-39 Identities = 140/168 (83%), Gaps = 10/168 (6%) Strand=Plus/Plus Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGG----TACTA--TCA 396 ||||||||||||||||||||||||||| ||||||| ||||||| ||| | || Sbjct 39 AGCATGTATTAGCTCTAGAATTACCACAGTTATCCG---AGTAAGGATTTTACAACATCC 95 Query 397 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACT 456 ||||| ||||||||||||||||||||||||| ||||| | || | || |||| Sbjct 96 CATAAATCATAACTGATTTAATGAGCCATTCGCGGTTTCGCCTTAG-GTCGGCAGGTACT 154 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 155 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 202 >seq260259 Length=427 Score = 93.3 bits (102), Expect = 1e-16 Identities = 51/51 (100%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 454 ACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503867655936